Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm9847-201ENSMUST00000052528 599 ntBASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Trav3-4A0A075B654 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav3-4A0A075B654 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Gm43137-201ENSMUST00000198052 594 ntBASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav3-4A0A075B654 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-4A0A075B654 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-4A0A075B654 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-4A0A075B654 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.64
Trav3-4A0A075B654 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-4A0A075B654 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.02□□□□□ -0.64
Trav3-4A0A075B654 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-4A0A075B654 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav3-4A0A075B654 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Gm12251-201ENSMUST00000117893 792 ntBASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms