Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav10A0A075B642 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav10A0A075B642 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav10A0A075B642 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav10A0A075B642 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav10A0A075B642 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav10A0A075B642 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav10A0A075B642 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav10A0A075B642 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav10A0A075B642 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav10A0A075B642 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav10A0A075B642 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav10A0A075B642 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav10A0A075B642 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav10A0A075B642 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav10A0A075B642 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav10A0A075B642 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trav10A0A075B642 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav10A0A075B642 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav10A0A075B642 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav10A0A075B642 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav10A0A075B642 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav10A0A075B642 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav10A0A075B642 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav10A0A075B642 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.52□□□□□ -0.09
Trav10A0A075B642 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav10A0A075B642 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Gm18032-201ENSMUST00000222541 538 ntBASIC14.51□□□□□ -0.09
Trav10A0A075B642 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav10A0A075B642 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.5□□□□□ -0.09
Trav10A0A075B642 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.5□□□□□ -0.09
Trav10A0A075B642 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.5□□□□□ -0.09
Trav10A0A075B642 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.5□□□□□ -0.09
Trav10A0A075B642 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav10A0A075B642 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav10A0A075B642 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav10A0A075B642 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav10A0A075B642 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav10A0A075B642 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav10A0A075B642 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav10A0A075B642 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav10A0A075B642 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav10A0A075B642 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav10A0A075B642 Gm37722-201ENSMUST00000193757 208 ntBASIC14.49□□□□□ -0.09
Trav10A0A075B642 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav10A0A075B642 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms