Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav8-1A0A075B641 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav8-1A0A075B641 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav8-1A0A075B641 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav8-1A0A075B641 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav8-1A0A075B641 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav8-1A0A075B641 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav8-1A0A075B641 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav8-1A0A075B641 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Gm21168-201ENSMUST00000199646 1096 ntBASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 AC108858.1-201ENSMUST00000228461 1498 ntBASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav8-1A0A075B641 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav8-1A0A075B641 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms