Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-2A0A075B638 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-2A0A075B638 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav4-2A0A075B638 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-2A0A075B638 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-2A0A075B638 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-2A0A075B638 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-2A0A075B638 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-2A0A075B638 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-2A0A075B638 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-2A0A075B638 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-2A0A075B638 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-2A0A075B638 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav4-2A0A075B638 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-2A0A075B638 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 Gm12382-201ENSMUST00000122005 922 ntBASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4-2A0A075B638 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4-2A0A075B638 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.96□□□□□ -0.34
Trav4-2A0A075B638 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4-2A0A075B638 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4-2A0A075B638 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4-2A0A075B638 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav4-2A0A075B638 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Gm42545-201ENSMUST00000202755 922 ntBASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav4-2A0A075B638 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav4-2A0A075B638 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms