Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm38027-201ENSMUST00000192315 235 ntBASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.9□□□□□ -0.18
Trav15d-1-dv6d-1A0A075B624 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms