Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.06□□□□□ -0.48
Trav16d-dv11A0A075B617 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav16d-dv11A0A075B617 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Gm7291-201ENSMUST00000199147 382 ntBASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav16d-dv11A0A075B617 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav16d-dv11A0A075B617 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms