Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Mir2861-201ENSMUST00000175539 82 ntBASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Trav4n-4A0A075B615 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Trav4n-4A0A075B615 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Gm11643-201ENSMUST00000119578 864 ntBASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Gm43173-201ENSMUST00000202246 593 ntBASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Gm9959-201ENSMUST00000068277 390 ntBASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4n-4A0A075B615 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Cap2-205ENSMUST00000225824 1634 ntBASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms