Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Phf7-203ENSMUST00000226565 1971 ntBASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav9-1A0A075B601 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9-1A0A075B601 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9-1A0A075B601 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Trav9-1A0A075B601 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9-1A0A075B601 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9-1A0A075B601 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav9-1A0A075B601 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9-1A0A075B601 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav9-1A0A075B601 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 Gm5417-201ENSMUST00000079706 384 ntBASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav9-1A0A075B601 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav9-1A0A075B601 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav9-1A0A075B601 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms