Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv4A0A075B5I2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trbv4A0A075B5I2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trbv4A0A075B5I2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv4A0A075B5I2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Trbv4A0A075B5I2 Dancr-204ENSMUST00000132389 2347 ntBASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Gm10013-201ENSMUST00000106074 672 ntBASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Gm10231-201ENSMUST00000181584 441 ntBASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Gm10175-202ENSMUST00000208752 441 ntBASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv4A0A075B5I2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv4A0A075B5I2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms