Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 RNU6-1151P-201ENST00000384684 107 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 RNU6-1009P-201ENST00000390996 107 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 RNU6-272P-201ENST00000411028 104 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 MTND1P14-201ENST00000427400 950 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 USP9YP8-201ENST00000441913 500 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 DPPA3P1-201ENST00000448050 469 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 HMGB3P21-201ENST00000452483 547 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 RPL21P71-201ENST00000465598 459 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC069439.1-201ENST00000494739 167 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AL139099.1-201ENST00000497398 403 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 POU5F1P7-201ENST00000508759 541 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC093809.1-201ENST00000509155 340 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC009646.1-201ENST00000510455 318 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC024589.1-201ENST00000512207 263 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC026412.2-201ENST00000512270 1075 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 NPM1P41-201ENST00000512920 831 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 SNORA18.6-201ENST00000516792 115 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 RN7SKP283-201ENST00000517197 270 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AL121576.1-201ENST00000556055 276 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 HMGB1P33-201ENST00000563485 527 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC141257.3-201ENST00000572906 215 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 UBE2V2P2-201ENST00000587677 504 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 NF1P5-201ENST00000588287 448 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC008250.2-201ENST00000615261 205 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 Y_RNA.804-201ENST00000615262 101 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 LINC00901.1-201ENST00000617252 152 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 RMST_9.1-201ENST00000619945 193 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AP006248.2-201ENST00000623309 592 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AL022578.1-201ENST00000439330 1433 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC074029.4-201ENST00000624796 1859 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SALL3Q9BXA9 MTCO1P14-201ENST00000441695 1559 ntBASIC4.53□□□□□ -1.68
SALL3Q9BXA9 AC025125.1-201ENST00000624743 1922 ntBASIC4.53□□□□□ -1.69
SALL3Q9BXA9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 CASC19-280ENST00000642102 1351 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 OR4A15-201ENST00000314706 1035 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 Y_RNA.38-201ENST00000362617 102 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 RNA5SP42-201ENST00000364278 115 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 SNORA62.3-201ENST00000365110 153 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 RNU6-1103P-201ENST00000384150 107 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 CALM2P3-201ENST00000400429 449 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 RN7SKP156-201ENST00000410308 342 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 RNU6-628P-201ENST00000410675 107 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 RNU2-6P-201ENST00000411404 190 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AL136133.1-201ENST00000413694 376 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 RPL36AP36-201ENST00000418616 301 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AC091951.2-201ENST00000500762 203 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 RN7SKP83-201ENST00000516512 178 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AL391840.1-201ENST00000571144 367 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 MIR5685-201ENST00000579080 79 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 MIR3682-201ENST00000581338 84 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AC009977.1-201ENST00000586015 570 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AC115085.1-201ENST00000588924 229 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 KLKP1-201ENST00000595979 403 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AC020914.4-201ENST00000597690 277 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AL121757.2-201ENST00000611223 313 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 AC005344.1-201ENST00000613391 459 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.52□□□□□ -1.69
SALL3Q9BXA9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SALL3Q9BXA9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms