Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC100770.1-201ENST00000532310 322 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4□□□□□ -1.77
HMGB4Q8WW32 AC087481.2-201ENST00000565492 330 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC007599.1-201ENST00000568688 1174 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 MTND6P33-201ENST00000571794 183 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC087499.8-201ENST00000578406 226 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4□□□□□ -1.77
HMGB4Q8WW32 AC010928.3-201ENST00000587712 541 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4□□□□□ -1.77
HMGB4Q8WW32 AP001429.1-201ENST00000602568 530 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC068790.3-201ENST00000602988 553 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC091805.2-201ENST00000603848 235 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AL158211.4-201ENST00000606988 584 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC098614.4-201ENST00000607601 462 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AL391813.2-201ENST00000609113 322 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC108747.1-201ENST00000609508 535 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4□□□□□ -1.77
HMGB4Q8WW32 AC013562.2-201ENST00000611632 603 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC091304.9-201ENST00000612091 226 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC084757.4-201ENST00000616350 526 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 SMCR2_2.1-201ENST00000619783 161 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4□□□□□ -1.77
HMGB4Q8WW32 AP005264.7-201ENST00000625003 745 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HMGB4Q8WW32 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4□□□□□ -1.77
HMGB4Q8WW32 AL365440.1-201ENST00000436135 2167 ntBASIC4□□□□□ -1.77
HMGB4Q8WW32 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HMGB4Q8WW32 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HMGB4Q8WW32 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4□□□□□ -1.77
HMGB4Q8WW32 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 U8.3-201ENST00000363321 132 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 RNA5SP399-201ENST00000364003 117 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 U8.11-201ENST00000384699 133 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 U8.12-201ENST00000384701 133 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 MTND1P21-201ENST00000412991 285 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 RAD23BP2-201ENST00000416003 1207 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 TOMM22P1-201ENST00000418578 312 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 EIF4EP1-201ENST00000422311 642 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AL589872.1-201ENST00000426602 288 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC091286.1-201ENST00000431233 461 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 OR4K11P-201ENST00000431829 904 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC009961.2-201ENST00000435771 251 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 FTH1P1-201ENST00000437933 532 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 GAPDHP17-201ENST00000449858 1001 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AL645939.1-201ENST00000453429 797 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC007967.1-201ENST00000455422 1159 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 HMGB3P30-201ENST00000457863 606 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 U8.18-201ENST00000459285 133 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 MTND1P3-201ENST00000484956 952 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC011825.1-201ENST00000484967 388 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC078817.1-201ENST00000492623 435 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 RPL7P24-201ENST00000493052 752 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC096751.1-202ENST00000502691 1067 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 MTND2P33-201ENST00000506452 1031 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 CDC42P4-201ENST00000510507 563 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 RN7SKP298-201ENST00000515950 94 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 SNORA18.6-201ENST00000516792 115 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 RNU2-46P-201ENST00000517038 113 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC026403.1-201ENST00000518938 295 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AL391156.1-201ENST00000554965 554 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC005951.1-201ENST00000576706 485 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 MIR3913-1-201ENST00000577744 102 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 ZNF415P1-201ENST00000582279 1166 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 BX664608.1-201ENST00000610519 487 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC008498.1-201ENST00000613012 531 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AL391261.4-201ENST00000616012 481 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC099842.1-201ENST00000619919 596 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 MIR7154-201ENST00000620673 73 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AL353748.2-201ENST00000622148 471 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AL359715.5-201ENST00000623431 443 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC112204.3-201ENST00000623822 332 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AL138713.1-201ENST00000624026 2130 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 AC009093.8-201ENST00000641769 292 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 NOL8P1-201ENST00000508336 3529 ntBASIC3.99□□□□□ -1.77
HMGB4Q8WW32 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HMGB4Q8WW32 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms