Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VPS13CQ709C8 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS13CQ709C8 RNA5SP476-201ENST00000516613 103 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 AC234775.3-201ENST00000564612 656 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 MIR4421-201ENST00000578133 69 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 AC019159.1-201ENST00000605094 187 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 uc_338.5-201ENST00000611839 155 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 RNU6-1027P-201ENST00000383998 107 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 RN7SKP123-201ENST00000410732 291 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 RNU2-32P-201ENST00000411193 191 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC1.43□□□□□ -2.18
VPS13CQ709C8 HIGD1AP11-201ENST00000438361 280 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 MTND6P18-201ENST00000439477 513 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.43□□□□□ -2.18
VPS13CQ709C8 AC006390.1-201ENST00000508068 283 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 AC105429.2-201ENST00000610567 517 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 AC010678.1-201ENST00000614118 713 ntBASIC1.43□□□□□ -2.18
VPS13CQ709C8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 SNORA7.1-201ENST00000363750 139 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13CQ709C8 MTCYBP31-201ENST00000438855 1122 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.42□□□□□ -2.18
VPS13CQ709C8 AC092155.2-201ENST00000454675 477 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.42□□□□□ -2.18
VPS13CQ709C8 AL137847.3-201ENST00000611521 109 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 MIR7973-1-201ENST00000614683 76 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
VPS13CQ709C8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VPS13CQ709C8 AC017099.1-201ENST00000448261 1028 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13CQ709C8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13CQ709C8 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13CQ709C8 CBX3P5-201ENST00000552017 521 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 AC245036.5-201ENST00000596330 847 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 AC098679.5-201ENST00000624394 571 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 AC073869.7-201ENST00000640874 297 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.42□□□□□ -2.18
VPS13CQ709C8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS13CQ709C8 RPL23AP44-201ENST00000482216 473 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 AC109464.2-201ENST00000510242 943 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 AP005660.1-201ENST00000522972 293 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 OR4G1P-201ENST00000588632 938 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 AL133216.2-202ENST00000634512 349 ntBASIC1.42□□□□□ -2.18
VPS13CQ709C8 AL138787.1-202ENST00000437804 898 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 PIGFP3-201ENST00000441918 722 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 AIG1P1-201ENST00000503376 148 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 RPS3AP23-202ENST00000574601 686 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 MIR6734-201ENST00000621166 68 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS13CQ709C8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS13CQ709C8 Y_RNA.68-201ENST00000362881 102 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 RPL23AP7-203ENST00000449021 469 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 MTND5P12-201ENST00000502851 1449 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 ZNF542P-204ENST00000482727 1305 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS13CQ709C8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS13CQ709C8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VPS13CQ709C8 RNU6-60P-201ENST00000364792 103 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.41□□□□□ -2.18
VPS13CQ709C8 RPL21P5-201ENST00000554662 472 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 AC103987.3-201ENST00000582071 292 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 AC092159.4-201ENST00000624944 550 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 AC025048.6-202ENST00000627667 438 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 AP000553.5-201ENST00000641933 54 ntBASIC1.41□□□□□ -2.18
VPS13CQ709C8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.4□□□□□ -2.18
VPS13CQ709C8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
VPS13CQ709C8 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
VPS13CQ709C8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.18
VPS13CQ709C8 XKRYP4-201ENST00000414395 483 ntBASIC1.4□□□□□ -2.19
VPS13CQ709C8 AL354695.1-201ENST00000427935 228 ntBASIC1.4□□□□□ -2.19
VPS13CQ709C8 XKRYP5-201ENST00000449659 483 ntBASIC1.4□□□□□ -2.19
VPS13CQ709C8 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.4□□□□□ -2.19
VPS13CQ709C8 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.4□□□□□ -2.19
VPS13CQ709C8 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.4□□□□□ -2.19
VPS13CQ709C8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.4□□□□□ -2.19
VPS13CQ709C8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.4□□□□□ -2.19
VPS13CQ709C8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.4□□□□□ -2.19
VPS13CQ709C8 RNA5SP385-201ENST00000515947 110 ntBASIC1.4□□□□□ -2.19
VPS13CQ709C8 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.4□□□□□ -2.19
VPS13CQ709C8 AC124283.4-201ENST00000581815 456 ntBASIC1.4□□□□□ -2.19
VPS13CQ709C8 AC245100.2-201ENST00000454544 1679 ntBASIC1.4□□□□□ -2.19
VPS13CQ709C8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.39□□□□□ -2.19
VPS13CQ709C8 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.39□□□□□ -2.19
VPS13CQ709C8 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.39□□□□□ -2.19
VPS13CQ709C8 TPMTP3-201ENST00000411928 735 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms