Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NIPAL3Q6P499 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NIPAL3Q6P499 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NIPAL3Q6P499 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.99□□□□□ -1.93
NIPAL3Q6P499 AC092326.2-201ENST00000624772 1561 ntBASIC2.99□□□□□ -1.93
NIPAL3Q6P499 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 RNA5SP119-201ENST00000362715 117 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 Y_RNA.311-201ENST00000365068 96 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 MIR7-3-201ENST00000384898 110 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 TAF9BP1-201ENST00000396646 746 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 MIR1290-201ENST00000408735 78 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AL356320.2-201ENST00000417263 507 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 YME1L1P1-201ENST00000429435 297 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 NDUFB4P6-201ENST00000436819 366 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 CST9LP2-201ENST00000437612 320 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 FTH1P1-201ENST00000437933 532 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 OR10R1P-201ENST00000441524 1141 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AC115115.1-201ENST00000449927 248 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 BX322784.1-201ENST00000455793 1077 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AC005410.1-202ENST00000460347 485 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 RPL31P60-201ENST00000478450 367 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 RPL32P34-201ENST00000486380 400 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 KCTD9P5-201ENST00000504141 1170 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AC109464.2-201ENST00000510242 943 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 DEFB131D-201ENST00000526803 184 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 MIR4276-201ENST00000584832 70 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AC105224.1-201ENST00000587055 421 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AP001269.3-201ENST00000588718 329 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AL133393.1-201ENST00000603277 287 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AL162713.1-201ENST00000604480 262 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AL139022.2-201ENST00000606934 443 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AC131235.4-201ENST00000609288 620 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AP000254.1-201ENST00000609934 520 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AL391834.2-201ENST00000609982 546 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AC099778.2-201ENST00000610904 211 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AC012314.7-201ENST00000619693 93 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 AL445264.1-201ENST00000621719 171 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 OR8B1P-202ENST00000641132 1178 ntBASIC2.98□□□□□ -1.93
NIPAL3Q6P499 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NIPAL3Q6P499 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 AC110774.1-201ENST00000623567 2018 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 MIR148B-201ENST00000362252 99 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 RNU1-70P-201ENST00000362618 164 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 RNU4-68P-201ENST00000364314 141 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 Y_RNA.234-201ENST00000364409 97 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 Y_RNA.465-201ENST00000384293 102 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 RNU6-952P-201ENST00000391164 108 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 MIR1284-201ENST00000408337 120 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 RNA5SP44-201ENST00000410446 133 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 ATP5F1P1-201ENST00000433775 569 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 ZNF886P-201ENST00000450781 723 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 RPL21P8-201ENST00000465083 535 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 AP002884.2-201ENST00000471647 395 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 AC093663.1-201ENST00000497190 394 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 WBP1LP4-201ENST00000505043 344 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 AC079395.1-201ENST00000510981 262 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 AC026801.2-201ENST00000515352 425 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 RNA5SP217-201ENST00000515959 91 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 RNU6-150P-201ENST00000516237 95 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 RNU6-528P-201ENST00000516926 100 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 AC245166.1-201ENST00000521012 253 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
NIPAL3Q6P499 OR6C7P-201ENST00000547875 934 ntBASIC2.97□□□□□ -1.93
NIPAL3Q6P499 OR4T1P-201ENST00000554933 911 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms