Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
PRKDCP78527 RNU6-1027P-201ENST00000383998 107 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.19
PRKDCP78527 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.34□□□□□ -2.19
PRKDCP78527 AC244505.5-201ENST00000443639 207 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 AC017099.1-201ENST00000448261 1028 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 AC022431.1-201ENST00000450941 438 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.34□□□□□ -2.19
PRKDCP78527 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.34□□□□□ -2.19
PRKDCP78527 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.34□□□□□ -2.19
PRKDCP78527 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.34□□□□□ -2.19
PRKDCP78527 AC025048.6-202ENST00000627667 438 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 AL021368.2-201ENST00000606125 5352 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 SNORA51.4-201ENST00000364993 124 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 AC019155.1-201ENST00000382242 574 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
PRKDCP78527 AC019129.1-201ENST00000403786 261 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 AC027124.2-201ENST00000428249 105 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 CBWD4P-201ENST00000445695 655 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 EXTL2P1-201ENST00000446218 416 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.34□□□□□ -2.19
PRKDCP78527 RNU2-58P-201ENST00000516403 183 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 AC234775.3-201ENST00000564612 656 ntBASIC1.34□□□□□ -2.19
PRKDCP78527 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.34□□□□□ -2.19
PRKDCP78527 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
PRKDCP78527 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
PRKDCP78527 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
PRKDCP78527 MIR6073-201ENST00000352083 89 ntBASIC1.34□□□□□ -2.2
PRKDCP78527 RNU6-1080P-201ENST00000383982 107 ntBASIC1.34□□□□□ -2.2
PRKDCP78527 MIR625-201ENST00000385047 85 ntBASIC1.34□□□□□ -2.2
PRKDCP78527 SNORD88.1-201ENST00000408684 91 ntBASIC1.34□□□□□ -2.2
PRKDCP78527 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.34□□□□□ -2.2
PRKDCP78527 AL357520.1-201ENST00000441557 453 ntBASIC1.34□□□□□ -2.2
PRKDCP78527 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.34□□□□□ -2.2
PRKDCP78527 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.34□□□□□ -2.2
PRKDCP78527 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.34□□□□□ -2.2
PRKDCP78527 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.34□□□□□ -2.2
PRKDCP78527 AC007536.1-201ENST00000533382 349 ntBASIC1.34□□□□□ -2.2
PRKDCP78527 RPL21P5-201ENST00000554662 472 ntBASIC1.34□□□□□ -2.2
PRKDCP78527 AL078603.1-201ENST00000603824 313 ntBASIC1.34□□□□□ -2.2
PRKDCP78527 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.34□□□□□ -2.2
PRKDCP78527 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
PRKDCP78527 RPL23AP61-201ENST00000623642 466 ntBASIC1.34□□□□□ -2.2
PRKDCP78527 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.34□□□□□ -2.2
PRKDCP78527 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.2
PRKDCP78527 MTND5P27-201ENST00000428871 1720 ntBASIC1.34□□□□□ -2.2
PRKDCP78527 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.34□□□□□ -2.2
PRKDCP78527 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.34□□□□□ -2.2
PRKDCP78527 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.34□□□□□ -2.2
PRKDCP78527 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.34□□□□□ -2.2
PRKDCP78527 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.34□□□□□ -2.2
PRKDCP78527 DDX10P1-201ENST00000448545 1933 ntBASIC1.33□□□□□ -2.2
PRKDCP78527 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.33□□□□□ -2.2
PRKDCP78527 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
PRKDCP78527 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.33□□□□□ -2.2
PRKDCP78527 MTCYBP7-201ENST00000419540 1134 ntBASIC1.33□□□□□ -2.2
PRKDCP78527 ARPC3P1-201ENST00000437218 533 ntBASIC1.33□□□□□ -2.2
PRKDCP78527 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.33□□□□□ -2.2
PRKDCP78527 GZMAP1-201ENST00000503054 631 ntBASIC1.33□□□□□ -2.2
PRKDCP78527 RNA5SP385-201ENST00000515947 110 ntBASIC1.33□□□□□ -2.2
PRKDCP78527 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.33□□□□□ -2.2
PRKDCP78527 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.33□□□□□ -2.2
PRKDCP78527 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
PRKDCP78527 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
PRKDCP78527 U3.37-201ENST00000408528 213 ntBASIC1.33□□□□□ -2.2
PRKDCP78527 AL353093.1-201ENST00000441292 436 ntBASIC1.33□□□□□ -2.2
PRKDCP78527 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.33□□□□□ -2.2
PRKDCP78527 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC1.33□□□□□ -2.2
PRKDCP78527 AC245036.5-201ENST00000596330 847 ntBASIC1.33□□□□□ -2.2
PRKDCP78527 AP000705.1-201ENST00000454567 350 ntBASIC1.33□□□□□ -2.2
PRKDCP78527 HMGB3P15-201ENST00000507326 574 ntBASIC1.33□□□□□ -2.2
PRKDCP78527 AL137847.3-201ENST00000611521 109 ntBASIC1.33□□□□□ -2.2
PRKDCP78527 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.33□□□□□ -2.2
PRKDCP78527 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PRKDCP78527 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PRKDCP78527 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
PRKDCP78527 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.32□□□□□ -2.2
PRKDCP78527 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.32□□□□□ -2.2
PRKDCP78527 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.32□□□□□ -2.2
PRKDCP78527 AL389895.1-201ENST00000554127 252 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 MIR6734-201ENST00000621166 68 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.32□□□□□ -2.2
PRKDCP78527 AL133412.1-201ENST00000380194 2992 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PRKDCP78527 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PRKDCP78527 DYNLT3P1-201ENST00000378574 347 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 MIR548J-201ENST00000408833 112 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 AC104564.1-201ENST00000493028 407 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 AC093767.1-201ENST00000504523 156 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.32□□□□□ -2.2
PRKDCP78527 AC136443.5-201ENST00000603741 370 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
PRKDCP78527 AC008568.2-201ENST00000623862 2313 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
PRKDCP78527 RNU6-178P-201ENST00000384631 104 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 AL136133.1-201ENST00000413694 376 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 USP9YP15-201ENST00000442391 422 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 RPS27AP18-201ENST00000515536 459 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 NIFKP8-201ENST00000560500 874 ntBASIC1.32□□□□□ -2.2
PRKDCP78527 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms