Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RPS27P23-201ENST00000487608 251 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 AL024509.2-201ENST00000493462 493 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 MTCO3P44-201ENST00000510977 541 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC2.31□□□□□ -2.04
UBFD1O14562 RNU6-751P-201ENST00000516382 101 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.31□□□□□ -2.04
UBFD1O14562 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.31□□□□□ -2.04
UBFD1O14562 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.31□□□□□ -2.04
UBFD1O14562 AC090312.2-201ENST00000582687 378 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 SNORD84-203ENST00000584275 78 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.31□□□□□ -2.04
UBFD1O14562 AC104763.2-201ENST00000604179 382 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 AL590282.1-201ENST00000610379 1136 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 AC068831.7-201ENST00000616954 363 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 U73479.1-201ENST00000618062 168 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 AL160394.1-201ENST00000624765 724 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 AL590396.2-201ENST00000636511 1041 ntBASIC2.31□□□□□ -2.04
UBFD1O14562 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UBFD1O14562 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
UBFD1O14562 RNA5SP432-201ENST00000362480 116 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 OR5H15-201ENST00000383696 930 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 RNU6-1226P-201ENST00000384317 107 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 AL591034.1-201ENST00000407447 340 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 RNU6-272P-201ENST00000411028 104 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.3□□□□□ -2.04
UBFD1O14562 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.3□□□□□ -2.04
UBFD1O14562 MORF4L1P7-201ENST00000426038 703 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 MTND4LP7-201ENST00000431728 294 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 AC010881.1-201ENST00000433830 235 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 AC129850.1-201ENST00000436203 508 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.3□□□□□ -2.04
UBFD1O14562 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.3□□□□□ -2.04
UBFD1O14562 RPS24P6-201ENST00000452670 400 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 MTND3P4-201ENST00000453537 303 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 RPS3P1-201ENST00000456781 192 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.3□□□□□ -2.04
UBFD1O14562 AC026436.1-201ENST00000510537 270 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.3□□□□□ -2.04
UBFD1O14562 RNU4-29P-201ENST00000515943 174 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 SNORA31.20-201ENST00000517111 133 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
UBFD1O14562 UBTFL10-201ENST00000528532 562 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 AC025918.2-201ENST00000558683 763 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 AC027104.1-201ENST00000563702 681 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.3□□□□□ -2.04
UBFD1O14562 AC012254.4-201ENST00000588843 273 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 AC019159.1-201ENST00000605094 187 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.3□□□□□ -2.04
UBFD1O14562 AL109659.3-201ENST00000624985 950 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 MIR1291-201ENST00000627649 87 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 AC017104.5-201ENST00000637647 639 ntBASIC2.3□□□□□ -2.04
UBFD1O14562 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.3□□□□□ -2.04
UBFD1O14562 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.3□□□□□ -2.04
UBFD1O14562 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
UBFD1O14562 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
UBFD1O14562 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBFD1O14562 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.29□□□□□ -2.04
UBFD1O14562 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
UBFD1O14562 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
UBFD1O14562 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
UBFD1O14562 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
UBFD1O14562 RNU6-50P-201ENST00000362356 103 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 RNU6-1181P-201ENST00000384191 106 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.29□□□□□ -2.04
UBFD1O14562 RNA5SP56-201ENST00000410277 118 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 PAICSP7-201ENST00000419829 962 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 OFD1P18Y-201ENST00000420889 959 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.29□□□□□ -2.04
UBFD1O14562 PNRC2P1-201ENST00000423940 420 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.29□□□□□ -2.04
UBFD1O14562 AC114973.1-201ENST00000429057 632 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.29□□□□□ -2.04
UBFD1O14562 MYL8P-204ENST00000431574 518 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.29□□□□□ -2.04
UBFD1O14562 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.29□□□□□ -2.04
UBFD1O14562 ELOCP13-201ENST00000443934 329 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.29□□□□□ -2.04
UBFD1O14562 AC104389.3-201ENST00000445629 235 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.29□□□□□ -2.04
UBFD1O14562 UBL5P3-201ENST00000475112 231 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.29□□□□□ -2.04
UBFD1O14562 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.29□□□□□ -2.04
UBFD1O14562 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.29□□□□□ -2.04
UBFD1O14562 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.29□□□□□ -2.04
UBFD1O14562 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.29□□□□□ -2.04
UBFD1O14562 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.29□□□□□ -2.04
UBFD1O14562 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.29□□□□□ -2.04
UBFD1O14562 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.29□□□□□ -2.04
UBFD1O14562 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.29□□□□□ -2.04
UBFD1O14562 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.29□□□□□ -2.04
UBFD1O14562 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.29□□□□□ -2.04
UBFD1O14562 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
UBFD1O14562 AC087241.2-201ENST00000535801 324 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 AC004217.3-201ENST00000551552 878 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.29□□□□□ -2.04
UBFD1O14562 AC135178.6-201ENST00000605314 398 ntBASIC2.29□□□□□ -2.04
UBFD1O14562 MIR6817-201ENST00000615588 66 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms