Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 uc_338.1-201ENST00000612113 180 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AP000484.1-201ENST00000620067 1252 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AL445264.1-201ENST00000621719 171 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 AP000770.2-201ENST00000623694 100 ntBASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SMC4Q9NTJ3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 RNU6-157P-201ENST00000383957 107 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 RNA5SP44-201ENST00000410446 133 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 RNA5SP229-201ENST00000410809 99 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 HMGB3P11-201ENST00000440127 604 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AL591719.1-201ENST00000444669 744 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 HMGN1P18-201ENST00000457642 277 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 snoU13.4-201ENST00000458916 104 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 RPS4XP13-201ENST00000483219 789 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AC023538.1-201ENST00000534576 736 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AC011611.1-201ENST00000552179 197 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 NCAPGP2-201ENST00000557911 754 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AC025588.2-201ENST00000604851 466 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 MIR8058-201ENST00000615737 89 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 XIST_intron.1-201ENST00000619444 68 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AC012314.7-201ENST00000619693 93 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AC244100.1-202ENST00000621554 382 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 AL353748.2-201ENST00000622148 471 ntBASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SMC4Q9NTJ3 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.21□□□□□ -1.73
SMC4Q9NTJ3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SMC4Q9NTJ3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 Z83843.1-201ENST00000604070 3685 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 RNU6-1155P-201ENST00000363554 107 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AL356131.1-201ENST00000405826 414 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 RNA5SP31-201ENST00000411144 127 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 HMGN1P24-201ENST00000412282 298 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AL008987.1-201ENST00000415528 237 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AC063979.1-201ENST00000415539 377 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AC006960.1-201ENST00000419980 153 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 SDCBPP1-201ENST00000440192 890 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AL353691.1-201ENST00000451332 387 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 PRSS3P4-201ENST00000453323 162 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AC010468.1-201ENST00000461022 817 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 RPL32P34-201ENST00000486380 400 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 DUXAP1-201ENST00000556632 463 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AL390208.1-201ENST00000605885 644 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 MIR7975-201ENST00000619350 68 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AL590240.3-201ENST00000621416 943 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 AC005183.1-201ENST00000603687 1979 ntBASIC4.21□□□□□ -1.74
SMC4Q9NTJ3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 AC092326.2-201ENST00000624772 1561 ntBASIC4.2□□□□□ -1.74
SMC4Q9NTJ3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms