Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CFAP54Q96N23 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
CFAP54Q96N23 MTCYBP7-201ENST00000419540 1134 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 AC005005.2-201ENST00000420779 380 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 CALM1P2-201ENST00000452941 448 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.85□□□□□ -2.11
CFAP54Q96N23 SNORA25.15-201ENST00000516487 89 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 RNU6-1223P-201ENST00000517124 104 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 RPL23AP39-201ENST00000415533 405 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 EXTL2P1-201ENST00000446218 416 ntBASIC1.85□□□□□ -2.11
CFAP54Q96N23 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.84□□□□□ -2.11
CFAP54Q96N23 AC244517.1-201ENST00000606030 2086 ntBASIC1.84□□□□□ -2.11
CFAP54Q96N23 OR4G1P-203ENST00000641984 1631 ntBASIC1.84□□□□□ -2.11
CFAP54Q96N23 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.84□□□□□ -2.11
CFAP54Q96N23 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.84□□□□□ -2.11
CFAP54Q96N23 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.84□□□□□ -2.11
CFAP54Q96N23 AC023043.3-201ENST00000593113 385 ntBASIC1.84□□□□□ -2.11
CFAP54Q96N23 AC068790.3-201ENST00000602988 553 ntBASIC1.84□□□□□ -2.11
CFAP54Q96N23 AC120053.1-201ENST00000607706 736 ntBASIC1.84□□□□□ -2.11
CFAP54Q96N23 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CFAP54Q96N23 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.84□□□□□ -2.11
CFAP54Q96N23 HPVC1-201ENST00000629899 1198 ntBASIC1.84□□□□□ -2.11
CFAP54Q96N23 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.84□□□□□ -2.11
CFAP54Q96N23 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CFAP54Q96N23 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
CFAP54Q96N23 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
CFAP54Q96N23 Y_RNA.393-201ENST00000383936 102 ntBASIC1.84□□□□□ -2.12
CFAP54Q96N23 AP000852.1-201ENST00000472460 573 ntBASIC1.84□□□□□ -2.12
CFAP54Q96N23 AC004486.1-201ENST00000546846 233 ntBASIC1.84□□□□□ -2.12
CFAP54Q96N23 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.84□□□□□ -2.12
CFAP54Q96N23 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.84□□□□□ -2.12
CFAP54Q96N23 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.83□□□□□ -2.12
CFAP54Q96N23 MIR151B-201ENST00000584249 96 ntBASIC1.83□□□□□ -2.12
CFAP54Q96N23 AC012119.1-201ENST00000603184 222 ntBASIC1.83□□□□□ -2.12
CFAP54Q96N23 AC002487.1-201ENST00000604565 994 ntBASIC1.83□□□□□ -2.12
CFAP54Q96N23 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CFAP54Q96N23 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.83□□□□□ -2.12
CFAP54Q96N23 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
CFAP54Q96N23 SET-203ENST00000372688 801 ntTSL 2 BASIC1.83□□□□□ -2.12
CFAP54Q96N23 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.83□□□□□ -2.12
CFAP54Q96N23 RNU6-516P-201ENST00000411381 104 ntBASIC1.83□□□□□ -2.12
CFAP54Q96N23 AL353093.1-201ENST00000441292 436 ntBASIC1.83□□□□□ -2.12
CFAP54Q96N23 AC093331.1-201ENST00000521474 169 ntBASIC1.83□□□□□ -2.12
CFAP54Q96N23 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.83□□□□□ -2.12
CFAP54Q96N23 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.83□□□□□ -2.12
CFAP54Q96N23 7SK.7-201ENST00000603504 247 ntBASIC1.83□□□□□ -2.12
CFAP54Q96N23 AL133216.2-202ENST00000634512 349 ntBASIC1.83□□□□□ -2.12
CFAP54Q96N23 AC099654.11-201ENST00000638857 294 ntBASIC1.83□□□□□ -2.12
CFAP54Q96N23 AL592437.2-201ENST00000421655 2434 ntBASIC1.82□□□□□ -2.12
CFAP54Q96N23 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CFAP54Q96N23 RNU6-53P-201ENST00000365367 106 ntBASIC1.82□□□□□ -2.12
CFAP54Q96N23 IPMKP1-201ENST00000425988 855 ntBASIC1.82□□□□□ -2.12
CFAP54Q96N23 SAR1AP4-201ENST00000429225 591 ntBASIC1.82□□□□□ -2.12
CFAP54Q96N23 AF186190.1-201ENST00000517470 480 ntBASIC1.82□□□□□ -2.12
CFAP54Q96N23 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.82□□□□□ -2.12
CFAP54Q96N23 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.82□□□□□ -2.12
CFAP54Q96N23 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CFAP54Q96N23 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.82□□□□□ -2.12
CFAP54Q96N23 AL627309.6-201ENST00000606857 840 ntBASIC1.82□□□□□ -2.12
CFAP54Q96N23 uc_338.5-201ENST00000611839 155 ntBASIC1.82□□□□□ -2.12
CFAP54Q96N23 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.82□□□□□ -2.12
CFAP54Q96N23 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.82□□□□□ -2.12
CFAP54Q96N23 MIR5089-201ENST00000580047 84 ntBASIC1.82□□□□□ -2.12
CFAP54Q96N23 AP000787.2-201ENST00000604432 568 ntBASIC1.82□□□□□ -2.12
CFAP54Q96N23 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CFAP54Q96N23 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
CFAP54Q96N23 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CFAP54Q96N23 SNORA48.3-201ENST00000391081 134 ntBASIC1.82□□□□□ -2.12
CFAP54Q96N23 MIR1294-201ENST00000408503 142 ntBASIC1.82□□□□□ -2.12
CFAP54Q96N23 AF131216.2-201ENST00000512316 564 ntBASIC1.82□□□□□ -2.12
CFAP54Q96N23 CBX3P4-201ENST00000538909 354 ntBASIC1.82□□□□□ -2.12
CFAP54Q96N23 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.82□□□□□ -2.12
CFAP54Q96N23 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
CFAP54Q96N23 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CFAP54Q96N23 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CFAP54Q96N23 DEFB109C-201ENST00000382575 264 ntBASIC1.81□□□□□ -2.12
CFAP54Q96N23 DEFB109B-201ENST00000382656 264 ntBASIC1.81□□□□□ -2.12
CFAP54Q96N23 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.81□□□□□ -2.12
CFAP54Q96N23 SDR42E1P3-201ENST00000438345 502 ntBASIC1.81□□□□□ -2.12
CFAP54Q96N23 RPS29P1-201ENST00000465274 159 ntBASIC1.81□□□□□ -2.12
CFAP54Q96N23 ARL4AP2-201ENST00000507378 601 ntBASIC1.81□□□□□ -2.12
CFAP54Q96N23 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.81□□□□□ -2.12
CFAP54Q96N23 AC098848.2-201ENST00000588023 330 ntBASIC1.81□□□□□ -2.12
CFAP54Q96N23 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CFAP54Q96N23 ZNF355P-201ENST00000427301 3216 ntBASIC1.81□□□□□ -2.12
CFAP54Q96N23 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CFAP54Q96N23 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC1.81□□□□□ -2.12
CFAP54Q96N23 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CFAP54Q96N23 AC002524.1-201ENST00000411687 547 ntBASIC1.81□□□□□ -2.12
CFAP54Q96N23 AIMP1P1-201ENST00000418670 937 ntBASIC1.81□□□□□ -2.12
CFAP54Q96N23 AC244505.4-201ENST00000434905 287 ntBASIC1.81□□□□□ -2.12
CFAP54Q96N23 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.81□□□□□ -2.12
CFAP54Q96N23 SSXP5-201ENST00000443473 287 ntBASIC1.81□□□□□ -2.12
CFAP54Q96N23 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.81□□□□□ -2.12
CFAP54Q96N23 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
CFAP54Q96N23 PNPT1P2-201ENST00000456768 2050 ntBASIC1.8□□□□□ -2.12
CFAP54Q96N23 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CFAP54Q96N23 DNAJC19P6-201ENST00000401853 280 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms