Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 MTCO3P24-201ENST00000572729 782 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 MIR5092-201ENST00000583139 88 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 SNORD84-203ENST00000584275 78 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AC069234.5-201ENST00000611056 416 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 MTCO1P18-201ENST00000455518 1419 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 AL136520.1-201ENST00000600311 1322 ntBASIC2.39□□□□□ -2.03
LMX1AQ8TE12 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
LMX1AQ8TE12 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 RNA5SP27-201ENST00000363839 119 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 CYCSP45-201ENST00000402289 315 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 RPS3AP9-201ENST00000417027 792 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 SETP8-201ENST00000435341 628 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 SNRPEP4-201ENST00000435815 279 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 HMGB1P15-201ENST00000453854 435 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 AC010285.1-201ENST00000470580 392 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 RPS26P21-201ENST00000475397 348 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 AC015724.1-201ENST00000478577 156 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 SNORA31.20-201ENST00000517111 133 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 AP003385.6-201ENST00000531603 374 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 AC123904.3-201ENST00000547218 814 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 MIR4504-201ENST00000577413 92 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 MTCO3P13-201ENST00000577757 781 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 AC010620.2-201ENST00000600135 313 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 KATNBL1P5-201ENST00000605015 517 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 AL627309.6-201ENST00000606857 840 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 AC021851.1-201ENST00000608537 1082 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 AC046143.2-201ENST00000609789 160 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 AC092608.3-201ENST00000625017 386 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 AL356118.1-201ENST00000635272 1078 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 MIR6733-201ENST00000635723 61 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 MAPK10-266ENST00000641066 6555 ntBASIC2.38□□□□□ -2.03
LMX1AQ8TE12 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LMX1AQ8TE12 ZNF734P-201ENST00000419494 1534 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC006020.1-201ENST00000420179 1854 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AL355596.1-201ENST00000565399 3996 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 RNU6-796P-201ENST00000391086 107 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 UBE2V1P15-201ENST00000407776 448 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 RNA5SP425-201ENST00000410336 112 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC073264.1-201ENST00000411508 416 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 YWHAZP8-201ENST00000436935 731 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 RPL21P2-201ENST00000440049 481 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AL691517.1-201ENST00000440833 1235 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 MTCO3P43-201ENST00000440974 771 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC010095.1-201ENST00000443543 144 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 MTND1P33-201ENST00000446251 917 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AL500527.1-201ENST00000448532 255 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AL353705.4-201ENST00000449661 238 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC108729.2-201ENST00000476543 840 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC126182.1-201ENST00000478134 357 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 MTCYBP37-201ENST00000510642 1133 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC105914.1-201ENST00000511798 226 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC104229.1-201ENST00000561364 255 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC009063.1-201ENST00000563342 702 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 EIF5A2P1-201ENST00000564027 460 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC008687.2-201ENST00000597865 520 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AC012467.1-201ENST00000607740 256 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 AL163051.2-201ENST00000618976 735 ntBASIC2.37□□□□□ -2.03
LMX1AQ8TE12 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms