Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP43Q70EL4 Y_RNA.394-201ENST00000383942 103 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 Y_RNA.453-201ENST00000384223 109 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 MIR659-201ENST00000384963 97 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 RNU6-1300P-201ENST00000391046 108 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AC007066.1-201ENST00000392902 381 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AL590004.1-201ENST00000405321 300 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 FAT1P1-201ENST00000406588 507 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 MTND2P23-201ENST00000422990 651 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.67□□□□□ -1.82
USP43Q70EL4 NPM1P34-201ENST00000428821 893 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AL365184.2-201ENST00000431139 435 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC083863.1-201ENST00000438811 231 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.67□□□□□ -1.82
USP43Q70EL4 HSFY6P-201ENST00000445573 403 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.67□□□□□ -1.82
USP43Q70EL4 NIPA2P5-201ENST00000452282 464 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.67□□□□□ -1.82
USP43Q70EL4 RPS20P24-201ENST00000457473 361 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 RPL36AP13-201ENST00000457490 317 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 ARPC3P2-201ENST00000457786 533 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 RPL21P126-201ENST00000470049 478 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 RPS3AP17-201ENST00000472594 777 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 RPS29P19-201ENST00000479709 171 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 RPS29P25-201ENST00000481709 171 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP43Q70EL4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC111193.1-201ENST00000504097 155 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP43Q70EL4 SNX5P1-201ENST00000505757 1041 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC026784.1-201ENST00000507986 352 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.67□□□□□ -1.82
USP43Q70EL4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.67□□□□□ -1.82
USP43Q70EL4 RN7SKP298-201ENST00000515950 94 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 RNA5SP73-201ENST00000516744 108 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC087276.1-201ENST00000529659 480 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.67□□□□□ -1.82
USP43Q70EL4 PCMTD1P2-201ENST00000565017 355 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AC091489.2-201ENST00000566263 604 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC099489.2-201ENST00000574976 260 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.67□□□□□ -1.82
USP43Q70EL4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC098614.4-201ENST00000607601 462 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AP004247.3-201ENST00000608682 624 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AC091834.1-201ENST00000614543 472 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 MIR7973-1-201ENST00000614683 76 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AC010205.1-201ENST00000616668 449 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AC018816.2-201ENST00000621460 353 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AP003122.6-201ENST00000623831 495 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 MIR3653-201ENST00000625572 110 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC140479.6-201ENST00000633535 357 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 ZNF826P-207ENST00000622273 1910 ntBASIC3.67□□□□□ -1.82
USP43Q70EL4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP43Q70EL4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP43Q70EL4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.67□□□□□ -1.82
USP43Q70EL4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP43Q70EL4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.67□□□□□ -1.82
USP43Q70EL4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.66□□□□□ -1.82
USP43Q70EL4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
USP43Q70EL4 Y_RNA.9-201ENST00000362354 101 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 RNU6-433P-201ENST00000363216 104 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 SNORA63-201ENST00000363450 132 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 RNU6-501P-201ENST00000364072 100 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 RNA5SP88-201ENST00000365560 109 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 RNU6-907P-201ENST00000390924 102 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 RPL31P1-201ENST00000398116 372 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AL590704.1-201ENST00000402856 794 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 MIR1284-201ENST00000408337 120 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 RPL21P111-201ENST00000418453 477 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.66□□□□□ -1.82
USP43Q70EL4 ARF4P2-201ENST00000430209 526 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.66□□□□□ -1.82
USP43Q70EL4 RPL21P110-201ENST00000433345 446 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.66□□□□□ -1.82
USP43Q70EL4 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.66□□□□□ -1.82
USP43Q70EL4 UBE2FP3-201ENST00000436366 524 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.66□□□□□ -1.82
USP43Q70EL4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.66□□□□□ -1.82
USP43Q70EL4 PHBP16-201ENST00000446318 950 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.66□□□□□ -1.82
USP43Q70EL4 RPL23AP81-201ENST00000455252 467 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 CEACAMP4-201ENST00000457676 421 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 AC053481.1-201ENST00000467217 306 ntBASIC3.66□□□□□ -1.82
USP43Q70EL4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms