Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 HMGB1P5-201ENST00000255320 642 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 SNORD116-12-201ENST00000384468 92 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AL079342.2-201ENST00000403367 482 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AL035410.1-201ENST00000427409 427 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 SEPT7P5-201ENST00000434048 306 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC092393.1-201ENST00000439625 742 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 snoU109.3-201ENST00000459477 145 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC092185.1-201ENST00000491371 97 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC113420.1-201ENST00000507903 571 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 ARL2BPP6-201ENST00000512757 439 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 MTATP6P9-201ENST00000515039 680 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC104027.1-201ENST00000521887 300 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AP001317.1-201ENST00000531194 960 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC018630.1-201ENST00000541376 925 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 MTCYBP23-201ENST00000558717 1102 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC034105.3-201ENST00000565294 442 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 MIR4666A-201ENST00000580160 79 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AL133393.1-201ENST00000603277 287 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC015871.2-201ENST00000603605 948 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC024060.1-201ENST00000607052 494 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC024933.1-201ENST00000608472 348 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC092954.1-201ENST00000609121 445 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AC123767.1-202ENST00000620407 817 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 AP003485.1-201ENST00000625093 753 ntBASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHROOM1Q2M3G4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 RNU5E-10P-201ENST00000363506 118 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 RNU6-657P-201ENST00000383904 107 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 Y_RNA.472-201ENST00000384322 102 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 RNU6-821P-201ENST00000390995 107 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 MTCO1P56-201ENST00000401674 224 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 RPL7P25-201ENST00000404151 721 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 AC099677.1-201ENST00000420575 175 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 MTCO1P3-201ENST00000429327 192 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 ISCA1P2-201ENST00000438679 421 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 AC079776.3-201ENST00000450665 370 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 SNORA31.1-201ENST00000515993 133 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 SNORA31.5-201ENST00000516190 133 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 SNORA48.10-201ENST00000516965 160 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 AC093519.1-201ENST00000566109 298 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 BDH2P1-201ENST00000602288 736 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 RPL12P50-201ENST00000603116 116 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 AL157392.4-201ENST00000609756 345 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 AC006213.4-201ENST00000616184 634 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 MFSD8-245ENST00000641743 948 ntBASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.49□□□□□ -1.85
SHROOM1Q2M3G4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 MIR449A-201ENST00000362113 91 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 RNU6-492P-201ENST00000363035 104 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 RNU4-78P-201ENST00000410940 126 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 MTCO3P1-205ENST00000422088 832 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 MTCO2P23-201ENST00000425216 680 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 B3GNT2P1-201ENST00000434960 952 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 AC112492.1-201ENST00000449607 712 ntBASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.48□□□□□ -1.85
SHROOM1Q2M3G4 AP002884.2-201ENST00000471647 395 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms