Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 GXYLT1P1-201ENST00000446657 490 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 MTCO3P2-201ENST00000457365 171 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.5□□□□□ -2.01
UPK1AO00322 GAPDHP39-201ENST00000481866 979 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 VPS26AP1-201ENST00000483197 979 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.5□□□□□ -2.01
UPK1AO00322 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
UPK1AO00322 AC048346.1-201ENST00000510247 144 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.5□□□□□ -2.01
UPK1AO00322 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.5□□□□□ -2.01
UPK1AO00322 SNRPGP16-201ENST00000533275 226 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.5□□□□□ -2.01
UPK1AO00322 COX6CP3-201ENST00000580869 223 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 AC092474.3-201ENST00000603022 568 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 AP002906.1-201ENST00000603405 233 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.5□□□□□ -2.01
UPK1AO00322 AC009318.4-201ENST00000620496 486 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 AC097460.3-201ENST00000623099 442 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 AC040168.1-201ENST00000623594 991 ntBASIC2.5□□□□□ -2.01
UPK1AO00322 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
UPK1AO00322 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
UPK1AO00322 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
UPK1AO00322 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
UPK1AO00322 AL136520.1-201ENST00000600311 1322 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
UPK1AO00322 VTRNA1-1-201ENST00000363120 99 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 RNU6-619P-201ENST00000365146 108 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.49□□□□□ -2.01
UPK1AO00322 MIR9-1-201ENST00000385198 89 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 AL139095.1-201ENST00000404326 391 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.49□□□□□ -2.01
UPK1AO00322 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.49□□□□□ -2.01
UPK1AO00322 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.49□□□□□ -2.01
UPK1AO00322 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.49□□□□□ -2.01
UPK1AO00322 RPL23AP83-201ENST00000434984 473 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 AC105272.1-201ENST00000438604 198 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 AC027673.1-201ENST00000456245 405 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
UPK1AO00322 AC118282.2-201ENST00000508739 374 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.49□□□□□ -2.01
UPK1AO00322 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.49□□□□□ -2.01
UPK1AO00322 RN7SKP132-201ENST00000516001 208 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 SNORD59.2-201ENST00000516873 68 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 ARL2BPP5-201ENST00000523141 481 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 AC022690.1-201ENST00000526681 550 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 OR4P1P-201ENST00000530808 1136 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 AL391156.1-201ENST00000554965 554 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 MTCO1P40-201ENST00000574371 625 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.49□□□□□ -2.01
UPK1AO00322 AC138761.3-201ENST00000579993 334 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 MIR4635-201ENST00000583759 79 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.49□□□□□ -2.01
UPK1AO00322 AC060766.3-201ENST00000591442 263 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 AC133794.1-201ENST00000602731 914 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 MIR8084-201ENST00000614105 89 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 AL355810.1-201ENST00000614629 552 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 ZNF663P-202ENST00000641770 1131 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
UPK1AO00322 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.49□□□□□ -2.01
UPK1AO00322 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
UPK1AO00322 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
UPK1AO00322 SGO1P2-201ENST00000429458 1589 ntBASIC2.49□□□□□ -2.01
UPK1AO00322 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
UPK1AO00322 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
UPK1AO00322 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
UPK1AO00322 RNA5SP210-201ENST00000391034 120 ntBASIC2.48□□□□□ -2.01
UPK1AO00322 AL360182.1-201ENST00000397433 468 ntBASIC2.48□□□□□ -2.01
UPK1AO00322 AL356057.3-201ENST00000402607 340 ntBASIC2.48□□□□□ -2.01
UPK1AO00322 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.48□□□□□ -2.01
UPK1AO00322 DEFB130D-201ENST00000426866 237 ntBASIC2.48□□□□□ -2.01
UPK1AO00322 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.48□□□□□ -2.01
UPK1AO00322 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.48□□□□□ -2.01
UPK1AO00322 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.48□□□□□ -2.01
UPK1AO00322 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.48□□□□□ -2.01
UPK1AO00322 BTBD7P2-201ENST00000441962 620 ntBASIC2.48□□□□□ -2.01
UPK1AO00322 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.48□□□□□ -2.01
UPK1AO00322 OR51B8P-201ENST00000449892 769 ntBASIC2.48□□□□□ -2.01
UPK1AO00322 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.48□□□□□ -2.01
UPK1AO00322 RPS3AP14-201ENST00000483907 780 ntBASIC2.48□□□□□ -2.01
UPK1AO00322 AC093767.1-201ENST00000504523 156 ntBASIC2.48□□□□□ -2.01
UPK1AO00322 AP001804.3-201ENST00000525146 880 ntBASIC2.48□□□□□ -2.01
UPK1AO00322 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
UPK1AO00322 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.48□□□□□ -2.01
UPK1AO00322 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.48□□□□□ -2.01
UPK1AO00322 AL033523.1-201ENST00000605153 153 ntBASIC2.48□□□□□ -2.01
UPK1AO00322 AC055876.5-201ENST00000605667 259 ntBASIC2.48□□□□□ -2.01
UPK1AO00322 RPL23AP88-201ENST00000605759 454 ntBASIC2.48□□□□□ -2.01
UPK1AO00322 AC026741.1-201ENST00000605892 482 ntBASIC2.48□□□□□ -2.01
UPK1AO00322 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.48□□□□□ -2.01
UPK1AO00322 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.48□□□□□ -2.01
UPK1AO00322 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
UPK1AO00322 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.47□□□□□ -2.01
UPK1AO00322 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
UPK1AO00322 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
UPK1AO00322 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.47□□□□□ -2.01
UPK1AO00322 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
UPK1AO00322 OR5J1P-201ENST00000313544 939 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 OR1L1-202ENST00000373686 1083 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 RPS3AP26-201ENST00000398259 784 ntBASIC2.47□□□□□ -2.01
UPK1AO00322 AC096664.2-201ENST00000411843 406 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms