Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 GAS5-AS1-201ENST00000602767 694 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 AL627309.6-201ENST00000606857 840 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC131235.4-201ENST00000609288 620 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 AL139418.1-201ENST00000613613 177 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 AL354976.1-201ENST00000613843 387 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 MIR6076-201ENST00000617521 113 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AL161637.1-201ENST00000622380 412 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 CR392039.5-201ENST00000623201 510 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 CR381572.1-201ENST00000625098 102 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 MKKS-204ENST00000639674 192 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.41□□□□□ -2.02
LINC00477Q96M19 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LINC00477Q96M19 AC130650.2-201ENST00000618736 2403 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 MTND5P24-201ENST00000438892 1767 ntBASIC2.41□□□□□ -2.02
LINC00477Q96M19 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LINC00477Q96M19 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LINC00477Q96M19 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LINC00477Q96M19 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.4□□□□□ -2.02
LINC00477Q96M19 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
LINC00477Q96M19 OR1S2-201ENST00000302592 978 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 RNU1-70P-201ENST00000362618 164 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 RNA5SP119-201ENST00000362715 117 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 RNU6-492P-201ENST00000363035 104 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 RNA5SP50-201ENST00000363731 107 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 CD24P4-201ENST00000382840 243 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 RNU6-83P-201ENST00000384568 112 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 Y_RNA.548-201ENST00000384656 105 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 RPL21P3-201ENST00000395517 478 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 RNA5SP229-201ENST00000410809 99 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC109583.1-201ENST00000432156 268 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 COX7BP2-201ENST00000437976 242 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LINC00477Q96M19 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC146507.2-201ENST00000460608 476 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 RN7SL601P-201ENST00000471221 293 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC069528.1-202ENST00000482888 637 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC108729.1-201ENST00000487812 947 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC113347.3-201ENST00000509113 148 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 RNU6-1225P-201ENST00000516336 65 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LINC00477Q96M19 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC023538.1-201ENST00000534576 736 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 AL121603.1-201ENST00000553815 142 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC005476.1-201ENST00000554427 397 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC093519.1-201ENST00000566109 298 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC022069.1-201ENST00000582910 658 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC093227.2-201ENST00000589357 285 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC019159.1-201ENST00000605094 187 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC008083.4-201ENST00000615076 444 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC090116.1-201ENST00000615679 446 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AL360181.4-201ENST00000621752 134 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC099654.7-201ENST00000635788 2127 ntBASIC2.4□□□□□ -2.03
LINC00477Q96M19 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LINC00477Q96M19 Z99496.1-201ENST00000469424 1477 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LINC00477Q96M19 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
LINC00477Q96M19 AC138915.1-201ENST00000565427 1685 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LINC00477Q96M19 SNRPEP3-201ENST00000338402 276 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 RNU6-1066P-201ENST00000363573 105 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 RNA5SP139-201ENST00000364340 117 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 RNU1-64P-201ENST00000365443 163 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
LINC00477Q96M19 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LINC00477Q96M19 DHFRP6-201ENST00000401776 268 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 AL590084.1-201ENST00000407885 387 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 RNA5SP38-201ENST00000410750 119 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 RPS29P4-201ENST00000414733 161 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.39□□□□□ -2.03
LINC00477Q96M19 AL139281.1-201ENST00000422120 335 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC00477Q96M19 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC00477Q96M19 AC127537.2-201ENST00000439258 465 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 AC092393.1-201ENST00000439625 742 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.39□□□□□ -2.03
LINC00477Q96M19 RABEPKP1-201ENST00000440529 1026 ntBASIC2.39□□□□□ -2.03
LINC00477Q96M19 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.39□□□□□ -2.03
LINC00477Q96M19 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LINC00477Q96M19 AL133547.1-201ENST00000448546 220 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms