Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC112198.1-201ENST00000505369 1220 ntBASIC3.49□□□□□ -1.85
VMP1Q96GC9 TXNP6-201ENST00000510190 310 ntBASIC3.49□□□□□ -1.85
VMP1Q96GC9 AC109445.1-201ENST00000512356 383 ntBASIC3.49□□□□□ -1.85
VMP1Q96GC9 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.49□□□□□ -1.85
VMP1Q96GC9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.49□□□□□ -1.85
VMP1Q96GC9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.49□□□□□ -1.85
VMP1Q96GC9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.49□□□□□ -1.85
VMP1Q96GC9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.49□□□□□ -1.85
VMP1Q96GC9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.49□□□□□ -1.85
VMP1Q96GC9 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VMP1Q96GC9 ACTR3BP3-201ENST00000565577 979 ntBASIC3.49□□□□□ -1.85
VMP1Q96GC9 MIR1254-2-201ENST00000579553 63 ntBASIC3.49□□□□□ -1.85
VMP1Q96GC9 CR392039.5-201ENST00000623201 510 ntBASIC3.49□□□□□ -1.85
VMP1Q96GC9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.49□□□□□ -1.85
VMP1Q96GC9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.49□□□□□ -1.85
VMP1Q96GC9 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.49□□□□□ -1.85
VMP1Q96GC9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.49□□□□□ -1.85
VMP1Q96GC9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.49□□□□□ -1.85
VMP1Q96GC9 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VMP1Q96GC9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.49□□□□□ -1.85
VMP1Q96GC9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VMP1Q96GC9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VMP1Q96GC9 AP003122.5-201ENST00000527668 3766 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 MTND5P27-201ENST00000428871 1720 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VMP1Q96GC9 RNU6-343P-201ENST00000364709 104 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 RNU6-359P-201ENST00000365466 108 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
VMP1Q96GC9 PTMAP2-201ENST00000397627 327 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 RPL5P18-201ENST00000406671 891 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 MIR1284-201ENST00000408337 120 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.48□□□□□ -1.85
VMP1Q96GC9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.48□□□□□ -1.85
VMP1Q96GC9 NDUFB4P7-201ENST00000423198 363 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 PPP1R11P2-201ENST00000423543 382 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 AC104332.2-201ENST00000429959 156 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 OR4K11P-201ENST00000431829 904 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 ATP5F1P1-201ENST00000433775 569 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 MTND5P14-201ENST00000441481 1267 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.48□□□□□ -1.85
VMP1Q96GC9 ZNF886P-201ENST00000450781 723 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 MTND2P24-201ENST00000453434 806 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.48□□□□□ -1.85
VMP1Q96GC9 AC010401.1-201ENST00000463867 348 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 RPS26P21-201ENST00000475397 348 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.48□□□□□ -1.85
VMP1Q96GC9 AC079395.1-201ENST00000510981 262 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 OR5G4P-201ENST00000525251 760 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VMP1Q96GC9 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.48□□□□□ -1.85
VMP1Q96GC9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.48□□□□□ -1.85
VMP1Q96GC9 AC011602.1-201ENST00000546484 331 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 HMGB1P14-201ENST00000557424 591 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 TGIF1P1-201ENST00000558095 802 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 CYCSP2-201ENST00000558168 301 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.48□□□□□ -1.85
VMP1Q96GC9 AC245389.1-201ENST00000605141 529 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 AL121772.2-201ENST00000614331 297 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VMP1Q96GC9 AL445984.1-201ENST00000637834 659 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.48□□□□□ -1.85
VMP1Q96GC9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VMP1Q96GC9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.48□□□□□ -1.85
VMP1Q96GC9 MTND5P7-201ENST00000413558 1798 ntBASIC3.48□□□□□ -1.85
VMP1Q96GC9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VMP1Q96GC9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VMP1Q96GC9 GABRG2-229ENST00000641017 3628 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VMP1Q96GC9 RNU6-97P-201ENST00000363387 104 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 Y_RNA.548-201ENST00000384656 105 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 MIR122-201ENST00000385044 85 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 SNORA11-201ENST00000408789 128 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 AL356320.2-201ENST00000417263 507 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 AC012498.1-201ENST00000424037 437 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 OR2B8P-201ENST00000432841 938 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 LSM1P1-201ENST00000438629 273 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 UBDP1-202ENST00000457888 382 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 RPS29P12-201ENST00000460178 152 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 RPL30P9-201ENST00000465586 330 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 AL049874.1-201ENST00000489560 388 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 AP002812.1-201ENST00000495378 474 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 RNA5SP208-201ENST00000516156 78 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 TRMT10BP1-201ENST00000519377 943 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 NDUFB9P3-201ENST00000521269 501 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.47□□□□□ -1.85
VMP1Q96GC9 COX6CP8-201ENST00000522620 226 ntBASIC3.47□□□□□ -1.85
VMP1Q96GC9 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms