Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 U2.16-201ENST00000613119 191 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 U2.12-201ENST00000613778 191 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 U2.20-201ENST00000613956 192 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 U2.9-201ENST00000615427 191 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 U2.11-201ENST00000616345 191 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 U2.2-201ENST00000616535 191 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 AC009032.1-201ENST00000617574 431 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 U2.3-201ENST00000617785 191 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 U2.19-201ENST00000618602 191 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 RNU2-1-201ENST00000618664 191 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 U2.6-201ENST00000619225 191 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 U2.5-201ENST00000619465 191 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 U2.10-201ENST00000620268 191 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 MIR6766-201ENST00000622641 72 ntBASIC3.17□□□□□ -1.9
NPHP4O75161 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.17□□□□□ -1.9
NPHP4O75161 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPHP4O75161 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NPHP4O75161 MIR142-201ENST00000384835 87 ntBASIC3.16□□□□□ -1.9
NPHP4O75161 MTATP6P31-201ENST00000406985 692 ntBASIC3.16□□□□□ -1.9
NPHP4O75161 AL353729.1-201ENST00000425044 720 ntBASIC3.16□□□□□ -1.9
NPHP4O75161 SAR1AP4-201ENST00000429225 591 ntBASIC3.16□□□□□ -1.9
NPHP4O75161 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.16□□□□□ -1.9
NPHP4O75161 MUPP-201ENST00000438111 566 ntBASIC3.16□□□□□ -1.9
NPHP4O75161 ELOCP13-201ENST00000443934 329 ntBASIC3.16□□□□□ -1.9
NPHP4O75161 ARL5AP2-201ENST00000444698 533 ntBASIC3.16□□□□□ -1.9
NPHP4O75161 RPL36AP33-201ENST00000450395 310 ntBASIC3.16□□□□□ -1.9
NPHP4O75161 AP000873.1-201ENST00000463987 400 ntBASIC3.16□□□□□ -1.9
NPHP4O75161 AC090071.1-201ENST00000507713 644 ntBASIC3.16□□□□□ -1.9
NPHP4O75161 MTND5P21-201ENST00000531961 522 ntBASIC3.16□□□□□ -1.9
NPHP4O75161 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.16□□□□□ -1.9
NPHP4O75161 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.16□□□□□ -1.9
NPHP4O75161 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.16□□□□□ -1.9
NPHP4O75161 AC128687.1-201ENST00000605304 619 ntBASIC3.16□□□□□ -1.9
NPHP4O75161 AC245517.5-201ENST00000611529 162 ntBASIC3.16□□□□□ -1.9
NPHP4O75161 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPHP4O75161 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.16□□□□□ -1.9
NPHP4O75161 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPHP4O75161 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
NPHP4O75161 AC097714.1-201ENST00000511272 1647 ntBASIC3.15□□□□□ -1.9
NPHP4O75161 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NPHP4O75161 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.15□□□□□ -1.91
NPHP4O75161 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NPHP4O75161 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.15□□□□□ -1.91
NPHP4O75161 Y_RNA.466-201ENST00000384294 113 ntBASIC3.15□□□□□ -1.91
NPHP4O75161 AC007390.1-201ENST00000415722 356 ntBASIC3.15□□□□□ -1.91
NPHP4O75161 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.15□□□□□ -1.91
NPHP4O75161 Z82205.1-201ENST00000428456 297 ntBASIC3.15□□□□□ -1.91
NPHP4O75161 AC098826.1-201ENST00000433943 471 ntBASIC3.15□□□□□ -1.91
NPHP4O75161 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.15□□□□□ -1.91
NPHP4O75161 HMGB3P30-201ENST00000457863 606 ntBASIC3.15□□□□□ -1.91
NPHP4O75161 SNORD108-201ENST00000459332 71 ntBASIC3.15□□□□□ -1.91
NPHP4O75161 SCARNA16.3-201ENST00000516595 184 ntBASIC3.15□□□□□ -1.91
NPHP4O75161 OR5D17P-201ENST00000531492 978 ntBASIC3.15□□□□□ -1.91
NPHP4O75161 AC105137.2-201ENST00000569073 466 ntBASIC3.15□□□□□ -1.91
NPHP4O75161 AC012182.1-201ENST00000570133 895 ntBASIC3.15□□□□□ -1.91
NPHP4O75161 MTCO3P13-201ENST00000577757 781 ntBASIC3.15□□□□□ -1.91
NPHP4O75161 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.15□□□□□ -1.91
NPHP4O75161 AC073348.1-201ENST00000623002 331 ntBASIC3.15□□□□□ -1.91
NPHP4O75161 AC092447.7-201ENST00000422212 1621 ntBASIC3.15□□□□□ -1.91
NPHP4O75161 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPHP4O75161 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPHP4O75161 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NPHP4O75161 RNU4-31P-201ENST00000384211 141 ntBASIC3.14□□□□□ -1.91
NPHP4O75161 MIR1303-201ENST00000408625 86 ntBASIC3.14□□□□□ -1.91
NPHP4O75161 RNU4-74P-201ENST00000411280 161 ntBASIC3.14□□□□□ -1.91
NPHP4O75161 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NPHP4O75161 RPL7P5-201ENST00000471472 736 ntBASIC3.14□□□□□ -1.91
NPHP4O75161 AC010265.1-201ENST00000513509 211 ntBASIC3.14□□□□□ -1.91
NPHP4O75161 RNU6-751P-201ENST00000516382 101 ntBASIC3.14□□□□□ -1.91
NPHP4O75161 OR7K1P-201ENST00000546439 926 ntBASIC3.14□□□□□ -1.91
NPHP4O75161 POLR2KP1-201ENST00000553226 168 ntBASIC3.14□□□□□ -1.91
NPHP4O75161 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.14□□□□□ -1.91
NPHP4O75161 MAGOH2P-202ENST00000584384 429 ntBASIC3.14□□□□□ -1.91
NPHP4O75161 BX322635.1-201ENST00000605804 496 ntBASIC3.14□□□□□ -1.91
NPHP4O75161 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.14□□□□□ -1.91
NPHP4O75161 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.14□□□□□ -1.91
NPHP4O75161 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.14□□□□□ -1.91
NPHP4O75161 MTND4P31-201ENST00000425607 1343 ntBASIC3.13□□□□□ -1.91
NPHP4O75161 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPHP4O75161 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NPHP4O75161 AC083799.1-201ENST00000366451 910 ntBASIC3.13□□□□□ -1.91
NPHP4O75161 MIR153-1-201ENST00000384914 90 ntBASIC3.13□□□□□ -1.91
NPHP4O75161 AL589655.1-201ENST00000405398 482 ntBASIC3.13□□□□□ -1.91
NPHP4O75161 FAT1P1-201ENST00000406588 507 ntBASIC3.13□□□□□ -1.91
NPHP4O75161 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.13□□□□□ -1.91
NPHP4O75161 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.13□□□□□ -1.91
NPHP4O75161 YWHAZP7-201ENST00000436906 631 ntBASIC3.13□□□□□ -1.91
NPHP4O75161 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.13□□□□□ -1.91
NPHP4O75161 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.13□□□□□ -1.91
NPHP4O75161 AC108157.1-201ENST00000510511 539 ntBASIC3.13□□□□□ -1.91
NPHP4O75161 AC067805.1-201ENST00000559344 470 ntBASIC3.13□□□□□ -1.91
NPHP4O75161 AC245128.3-201ENST00000594721 748 ntBASIC3.13□□□□□ -1.91
NPHP4O75161 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.13□□□□□ -1.91
NPHP4O75161 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.13□□□□□ -1.91
NPHP4O75161 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NPHP4O75161 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NPHP4O75161 SEPT7P7-201ENST00000420492 1301 ntBASIC3.13□□□□□ -1.91
NPHP4O75161 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.13□□□□□ -1.91
NPHP4O75161 AC005539.1-201ENST00000443768 1479 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms