Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXN3O00409 AP003181.2-201ENST00000528941 181 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.35□□□□□ -1.71
FOXN3O00409 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXN3O00409 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXN3O00409 AL133271.1-201ENST00000538229 291 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 SETP2-201ENST00000553886 926 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.35□□□□□ -1.71
FOXN3O00409 AC022968.1-201ENST00000567372 442 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AC025627.2-201ENST00000576220 160 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FOXN3O00409 MIR4644-201ENST00000579929 84 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 HMGN1P30-201ENST00000589286 268 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXN3O00409 AC079089.3-201ENST00000603094 673 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AL158211.4-201ENST00000606988 584 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AC012531.5-201ENST00000611375 151 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AC009159.1-201ENST00000618386 642 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXN3O00409 AL139089.1-201ENST00000620372 975 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 MIR6810-201ENST00000622701 70 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FOXN3O00409 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXN3O00409 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXN3O00409 MTND5P33-201ENST00000571250 1450 ntBASIC4.35□□□□□ -1.71
FOXN3O00409 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
FOXN3O00409 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXN3O00409 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXN3O00409 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXN3O00409 FAM91A3P-201ENST00000456826 2544 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXN3O00409 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXN3O00409 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXN3O00409 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXN3O00409 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
FOXN3O00409 RNU6-335P-201ENST00000364563 113 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXN3O00409 RNU6-195P-201ENST00000411352 109 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 TOMM22P1-201ENST00000418578 312 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 AC011742.1-201ENST00000431448 434 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 MTND1P4-201ENST00000435196 415 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXN3O00409 RPS4XP4-201ENST00000443195 763 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 MTND1P1-201ENST00000445453 368 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXN3O00409 AC010655.1-201ENST00000449336 292 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXN3O00409 CEACAMP4-201ENST00000457676 421 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 TPT1P7-201ENST00000458300 517 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 SNORD121B-201ENST00000458838 81 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 SNORD42A-201ENST00000459584 64 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 AC011825.1-201ENST00000484967 388 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 RPL29P14-201ENST00000495837 428 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXN3O00409 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.34□□□□□ -1.71
FOXN3O00409 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXN3O00409 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXN3O00409 SNORA18.6-201ENST00000516792 115 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 RAB9BP1-201ENST00000519581 626 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FOXN3O00409 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.34□□□□□ -1.71
FOXN3O00409 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXN3O00409 MIR4528-201ENST00000577763 90 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 MIR4284-201ENST00000578924 81 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.34□□□□□ -1.71
FOXN3O00409 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXN3O00409 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.34□□□□□ -1.71
FOXN3O00409 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.34□□□□□ -1.71
FOXN3O00409 AC121334.2-201ENST00000605387 271 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 AC138749.5-201ENST00000611461 208 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 AC015540.1-201ENST00000615828 501 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 AL159972.1-201ENST00000625150 448 ntBASIC4.34□□□□□ -1.71
FOXN3O00409 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXN3O00409 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
FOXN3O00409 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
FOXN3O00409 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
FOXN3O00409 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
FOXN3O00409 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN3O00409 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN3O00409 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXN3O00409 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXN3O00409 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.33□□□□□ -1.72
FOXN3O00409 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN3O00409 SNORD6-201ENST00000365444 73 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
FOXN3O00409 RNU6-1074P-201ENST00000383995 104 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 HSPE1P12-201ENST00000412576 301 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXN3O00409 JKAMPP1-201ENST00000413804 919 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 RAD23BP2-201ENST00000416003 1207 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 OR1AA1P-201ENST00000419597 916 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXN3O00409 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.33□□□□□ -1.72
FOXN3O00409 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXN3O00409 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.33□□□□□ -1.72
FOXN3O00409 NPM1P49-201ENST00000448027 714 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 RPS17P13-201ENST00000448974 407 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 AC007967.1-201ENST00000455422 1159 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 AC010285.1-201ENST00000470580 392 ntBASIC4.33□□□□□ -1.72
FOXN3O00409 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms