Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 RNU7-143P-201ENST00000516781 65 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 SNORA31.22-201ENST00000517204 135 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 IGKV2D-19-201ENST00000523346 262 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 MTND4LP18-201ENST00000526864 291 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC025627.2-201ENST00000576220 160 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC083760.1-201ENST00000589621 670 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AL590229.1-201ENST00000603497 542 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC008121.2-201ENST00000614647 523 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC112204.3-201ENST00000623822 332 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC048347.1-201ENST00000624621 427 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 ZNF826P-207ENST00000622273 1910 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 ELL2P3-201ENST00000457883 1602 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 MTND4P4-201ENST00000439033 1366 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC138915.3-201ENST00000562908 1389 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 RNY4P24-201ENST00000362735 96 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 RNU5F-7P-201ENST00000363696 115 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 RNA5SP505-201ENST00000364748 108 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 RNU5E-5P-201ENST00000365379 116 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 RNU6-533P-201ENST00000384144 107 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AL133270.1-201ENST00000402635 279 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 RPL7P25-201ENST00000404151 721 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 MTND1P21-201ENST00000412991 285 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 RPL7AP73-201ENST00000413490 353 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 PPP1R11P2-201ENST00000423543 382 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 COX6B1P7-201ENST00000430845 235 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC129850.1-201ENST00000436203 508 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AL513533.1-201ENST00000453728 415 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 snoU13.1-201ENST00000459157 104 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC092754.2-201ENST00000463506 460 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC116337.2-201ENST00000477662 156 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 RPS4XP13-201ENST00000483219 789 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC020893.1-201ENST00000502452 580 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 CBX3P3-201ENST00000508108 532 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC109464.2-201ENST00000510242 943 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC026801.2-201ENST00000515352 425 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 ZNF519P3-201ENST00000557158 1032 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC073114.1-201ENST00000612027 490 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC009268.2-201ENST00000621925 457 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC073530.2-201ENST00000623987 261 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC116667.1-201ENST00000604855 2072 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC005183.1-201ENST00000603687 1979 ntBASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CHMP1AQ9HD42 AC116096.1-201ENST00000566804 2314 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 SNORA60-201ENST00000362396 134 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 U3.4-201ENST00000363352 213 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 RNA5SP447-201ENST00000363749 119 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 RNU6-173P-201ENST00000364215 104 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 DEFB109C-201ENST00000382575 264 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 DEFB109B-201ENST00000382656 264 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 MTHFD2P2-201ENST00000407725 247 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 RNA5SP129-201ENST00000410276 118 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 RNU6-516P-201ENST00000411381 104 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 RPL17P12-201ENST00000413391 526 ntBASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.42□□□□□ -1.86
CHMP1AQ9HD42 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms