Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC109445.1-201ENST00000512356 383 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 Vault.1-201ENST00000516474 102 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 SNORA48.10-201ENST00000516965 160 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 HIGD1AP1-201ENST00000550979 275 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 VN1R82P-201ENST00000601481 356 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AC004223.4-201ENST00000612426 332 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 uc_338.25-201ENST00000613756 156 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AL607023.1-201ENST00000620045 248 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 Y_RNA.311-201ENST00000365068 96 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 RNU5A-2P-201ENST00000384337 116 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 SNORA48.8-201ENST00000391324 134 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 NDUFB4P5-201ENST00000415445 361 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 MTND4P20-201ENST00000424125 869 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 RPL23AP69-201ENST00000431134 458 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AC010881.1-201ENST00000433830 235 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 RPS25P9-201ENST00000435591 252 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AL117351.1-201ENST00000438864 766 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AL138799.3-201ENST00000438968 350 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AL591503.2-201ENST00000442314 1005 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 RPS12P18-201ENST00000442381 270 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 BX276092.4-201ENST00000452056 248 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 RPF2P2-201ENST00000504693 896 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 MTND1P22-201ENST00000510572 951 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AC117532.1-201ENST00000514638 323 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 MTND4LP31-201ENST00000514859 294 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 OR8L1P-201ENST00000534005 955 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.86□□□□□ -1.79
UPF2Q9HAU5 EIF5A2P1-201ENST00000564027 460 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 ISCA1P3-201ENST00000577104 373 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AC073657.2-201ENST00000605661 303 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 OR2AS2P-201ENST00000606902 342 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AC008083.4-201ENST00000615076 444 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.86□□□□□ -1.79
UPF2Q9HAU5 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 RPL23AP57-201ENST00000332361 466 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 RNU6-251P-201ENST00000363235 104 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 RNU6-1066P-201ENST00000363573 105 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 SNORD116-9-201ENST00000384000 95 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 SNORD116-3-201ENST00000384287 95 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 SNORD116-7-201ENST00000384404 95 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 SNORD116-5-201ENST00000384462 95 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 HSFY4P-201ENST00000415994 1181 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 AC019178.2-201ENST00000423595 505 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 BX119904.4-201ENST00000424402 301 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 AC234781.2-201ENST00000426370 994 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 OR51AB1P-201ENST00000429046 620 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 RPL29P29-201ENST00000448725 423 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 AC005178.1-201ENST00000508392 440 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 RNU6-1261P-201ENST00000517194 104 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 AP001207.1-201ENST00000524051 481 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 GTF2IP22-201ENST00000554443 182 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 MIR3915-201ENST00000578518 97 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 AL390838.2-201ENST00000602394 274 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 RNA5SP108-201ENST00000605921 117 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 AC091946.2-201ENST00000606105 291 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 AC243312.2-201ENST00000623340 601 ntBASIC3.85□□□□□ -1.79
UPF2Q9HAU5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.85□□□□□ -1.79
UPF2Q9HAU5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
UPF2Q9HAU5 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms