Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 SNORA51.4-201ENST00000364993 124 ntBASIC1.69□□□□□ -2.14
COL12A1Q99715 YWHAZP7-201ENST00000436906 631 ntBASIC1.69□□□□□ -2.14
COL12A1Q99715 MED6P1-201ENST00000439659 713 ntBASIC1.69□□□□□ -2.14
COL12A1Q99715 TTC39CP1-201ENST00000512513 755 ntBASIC1.69□□□□□ -2.14
COL12A1Q99715 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.69□□□□□ -2.14
COL12A1Q99715 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.69□□□□□ -2.14
COL12A1Q99715 HPVC1-201ENST00000629899 1198 ntBASIC1.69□□□□□ -2.14
COL12A1Q99715 AC095050.2-201ENST00000510748 1458 ntBASIC1.69□□□□□ -2.14
COL12A1Q99715 SAR1AP2-201ENST00000392696 594 ntBASIC1.69□□□□□ -2.14
COL12A1Q99715 AL035405.1-201ENST00000400795 710 ntBASIC1.69□□□□□ -2.14
COL12A1Q99715 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.69□□□□□ -2.14
COL12A1Q99715 CDC42P1-201ENST00000456658 548 ntBASIC1.69□□□□□ -2.14
COL12A1Q99715 snoU109.4-201ENST00000458953 143 ntBASIC1.69□□□□□ -2.14
COL12A1Q99715 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.69□□□□□ -2.14
COL12A1Q99715 AL845331.3-202ENST00000562856 261 ntBASIC1.69□□□□□ -2.14
COL12A1Q99715 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.69□□□□□ -2.14
COL12A1Q99715 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.69□□□□□ -2.14
COL12A1Q99715 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COL12A1Q99715 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.69□□□□□ -2.14
COL12A1Q99715 U8.8-201ENST00000365399 135 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 SNORA48.3-201ENST00000391081 134 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL12A1Q99715 MTCO3P31-201ENST00000405526 789 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 AC022634.1-201ENST00000520765 532 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.68□□□□□ -2.14
COL12A1Q99715 RFPL1S-203ENST00000539579 330 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.68□□□□□ -2.14
COL12A1Q99715 AL161670.1-201ENST00000554348 137 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.68□□□□□ -2.14
COL12A1Q99715 PSMA6P4-201ENST00000603247 718 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 AC002076.2-201ENST00000617362 122 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 RPL23AP61-201ENST00000623642 466 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.68□□□□□ -2.14
COL12A1Q99715 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.68□□□□□ -2.14
COL12A1Q99715 Y_RNA.251-201ENST00000364551 99 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 AC073136.2-201ENST00000417282 849 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 AC008173.1-201ENST00000418901 264 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 AC234781.4-201ENST00000419384 244 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 AC005005.2-201ENST00000420779 380 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
COL12A1Q99715 AC104564.1-201ENST00000493028 407 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.68□□□□□ -2.14
COL12A1Q99715 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
COL12A1Q99715 AC013404.1-201ENST00000413068 249 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 MTCYBP31-201ENST00000438855 1122 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 RPL36AP33-201ENST00000450395 310 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 Z99714.1-201ENST00000450463 807 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.68□□□□□ -2.14
COL12A1Q99715 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.68□□□□□ -2.14
COL12A1Q99715 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.68□□□□□ -2.14
COL12A1Q99715 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.68□□□□□ -2.14
COL12A1Q99715 AP001804.3-201ENST00000525146 880 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 AC018690.1-201ENST00000608144 626 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 Y_RNA.783-201ENST00000613546 102 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 MIR6767-201ENST00000637302 66 ntBASIC1.68□□□□□ -2.14
COL12A1Q99715 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
COL12A1Q99715 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
COL12A1Q99715 SET-203ENST00000372688 801 ntTSL 2 BASIC1.67□□□□□ -2.14
COL12A1Q99715 GSTA12P-201ENST00000402398 508 ntBASIC1.67□□□□□ -2.14
COL12A1Q99715 ARPC3P1-201ENST00000437218 533 ntBASIC1.67□□□□□ -2.14
COL12A1Q99715 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.67□□□□□ -2.14
COL12A1Q99715 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.67□□□□□ -2.14
COL12A1Q99715 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.67□□□□□ -2.14
COL12A1Q99715 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
COL12A1Q99715 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC1.67□□□□□ -2.14
COL12A1Q99715 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
COL12A1Q99715 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.67□□□□□ -2.14
COL12A1Q99715 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.67□□□□□ -2.14
COL12A1Q99715 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.67□□□□□ -2.14
COL12A1Q99715 KATNBL1P3-201ENST00000443475 909 ntBASIC1.67□□□□□ -2.14
COL12A1Q99715 IGHV3-76-201ENST00000522465 295 ntBASIC1.67□□□□□ -2.14
COL12A1Q99715 AP002748.2-201ENST00000528671 348 ntBASIC1.67□□□□□ -2.14
COL12A1Q99715 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
COL12A1Q99715 AC068790.3-201ENST00000602988 553 ntBASIC1.67□□□□□ -2.14
COL12A1Q99715 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
COL12A1Q99715 ZNF542P-204ENST00000482727 1305 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 RNU6-1027P-201ENST00000383998 107 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 AC093151.1-201ENST00000427711 313 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 RPS27P27-201ENST00000498779 255 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 AP000889.2-201ENST00000532684 490 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.66□□□□□ -2.14
COL12A1Q99715 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.66□□□□□ -2.14
COL12A1Q99715 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.66□□□□□ -2.14
COL12A1Q99715 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.66□□□□□ -2.14
COL12A1Q99715 MIR6734-201ENST00000621166 68 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL12A1Q99715 PNPT1P2-201ENST00000456768 2050 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.66□□□□□ -2.14
COL12A1Q99715 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.66□□□□□ -2.14
COL12A1Q99715 AC017099.1-201ENST00000448261 1028 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 RPL23AP55-201ENST00000498163 452 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 ARL4AP2-201ENST00000507378 601 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.66□□□□□ -2.14
COL12A1Q99715 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.66□□□□□ -2.14
COL12A1Q99715 MIR3186-201ENST00000577404 85 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 AL031274.2-201ENST00000599419 203 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 AC084768.2-201ENST00000622736 221 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 XPOTP1-201ENST00000443317 2398 ntBASIC1.66□□□□□ -2.14
COL12A1Q99715 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms