Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 AC025518.1-201ENST00000479856 347 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC010486.2-201ENST00000505572 483 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC026412.2-201ENST00000512270 1075 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC96Q2M329 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC96Q2M329 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC007458.1-201ENST00000542812 373 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC96Q2M329 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.15□□□□□ -1.75
CCDC96Q2M329 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.15□□□□□ -1.75
CCDC96Q2M329 KLKP1-201ENST00000595979 403 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC018638.7-201ENST00000605836 1114 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC022509.4-201ENST00000621404 572 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 AC091925.2-201ENST00000625059 256 ntBASIC4.15□□□□□ -1.75
CCDC96Q2M329 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.15□□□□□ -1.75
CCDC96Q2M329 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC96Q2M329 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCDC96Q2M329 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC96Q2M329 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC96Q2M329 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CCDC96Q2M329 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC96Q2M329 AP000776.1-201ENST00000530032 1663 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC96Q2M329 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC96Q2M329 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC96Q2M329 Y_RNA.25-201ENST00000362528 102 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 RNA5SP50-201ENST00000363731 107 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 SNORA70.4-201ENST00000365509 134 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC96Q2M329 SNORD51-201ENST00000384320 80 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 RNU5A-2P-201ENST00000384337 116 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 MIR490-201ENST00000384865 128 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 SAR1AP2-201ENST00000392696 594 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 AL591034.1-201ENST00000407447 340 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 RNA5SP80-201ENST00000410475 111 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 TRIAP1P1-201ENST00000427062 225 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.14□□□□□ -1.75
CCDC96Q2M329 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC96Q2M329 RPL23AP74-201ENST00000437246 471 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.14□□□□□ -1.75
CCDC96Q2M329 RPL12P26-201ENST00000452430 487 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 RPL21P134-201ENST00000453468 483 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 MTCO3P16-201ENST00000454456 754 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 ANKRD26P4-201ENST00000455755 950 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 RPL23AP31-201ENST00000456160 467 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 ST13P14-201ENST00000474095 734 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 RPS3AP22-201ENST00000488297 769 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 AC096751.1-202ENST00000502691 1067 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC96Q2M329 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC96Q2M329 MRPS33P3-201ENST00000513456 322 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 SNORA31.8-201ENST00000516327 108 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 RN7SKP83-201ENST00000516512 178 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 AC093331.1-201ENST00000521474 169 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC96Q2M329 SNRPGP16-201ENST00000533275 226 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC96Q2M329 AL391156.1-201ENST00000554965 554 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 DUXAP1-201ENST00000556632 463 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC96Q2M329 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.14□□□□□ -1.75
CCDC96Q2M329 AL390838.2-201ENST00000602394 274 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 AL451074.6-201ENST00000608512 729 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 MIR7851-201ENST00000610611 160 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC96Q2M329 AL732372.2-225ENST00000642124 456 ntBASIC4.14□□□□□ -1.75
CCDC96Q2M329 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC96Q2M329 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC96Q2M329 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC96Q2M329 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CCDC96Q2M329 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC96Q2M329 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC96Q2M329 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC96Q2M329 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC96Q2M329 AL353746.1-201ENST00000566293 6881 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 RNA5SP387-201ENST00000364226 106 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 ARF4P3-201ENST00000397387 509 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 RAP1BP1-201ENST00000412709 553 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC96Q2M329 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC96Q2M329 RPL21P32-201ENST00000419877 477 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 AL159987.2-201ENST00000432754 307 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CCDC96Q2M329 SKP1P1-201ENST00000438081 489 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 MTCYBP34-201ENST00000439552 670 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 MTCO2P25-201ENST00000447065 681 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 AL445669.2-201ENST00000454425 421 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 ATG12P2-201ENST00000456830 416 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC96Q2M329 snoU13.22-201ENST00000459428 104 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC96Q2M329 RPL7P5-201ENST00000471472 736 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 HMGN2P13-201ENST00000476476 274 ntBASIC4.13□□□□□ -1.75
CCDC96Q2M329 RNU6-1261P-201ENST00000517194 104 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms