Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HMGXB3Q12766 RNU2-17P-201ENST00000410290 190 ntBASIC3.29□□□□□ -1.88
HMGXB3Q12766 RPL7P53-201ENST00000421245 739 ntBASIC3.29□□□□□ -1.88
HMGXB3Q12766 AC129850.1-201ENST00000436203 508 ntBASIC3.29□□□□□ -1.88
HMGXB3Q12766 AC090543.1-201ENST00000492168 485 ntBASIC3.29□□□□□ -1.88
HMGXB3Q12766 NDUFB4P9-201ENST00000511646 388 ntBASIC3.29□□□□□ -1.88
HMGXB3Q12766 VTA1P2-201ENST00000520205 911 ntBASIC3.29□□□□□ -1.88
HMGXB3Q12766 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.29□□□□□ -1.88
HMGXB3Q12766 ARL2BPP2-201ENST00000550907 489 ntBASIC3.29□□□□□ -1.88
HMGXB3Q12766 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HMGXB3Q12766 AL450326.2-201ENST00000421913 1962 ntBASIC3.29□□□□□ -1.88
HMGXB3Q12766 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGXB3Q12766 DHFRP5-201ENST00000406944 564 ntBASIC3.29□□□□□ -1.88
HMGXB3Q12766 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGXB3Q12766 AC104332.2-201ENST00000429959 156 ntBASIC3.29□□□□□ -1.88
HMGXB3Q12766 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGXB3Q12766 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
HMGXB3Q12766 AC107393.1-201ENST00000512403 346 ntBASIC3.29□□□□□ -1.88
HMGXB3Q12766 IGHV3-76-201ENST00000522465 295 ntBASIC3.29□□□□□ -1.88
HMGXB3Q12766 AC090819.1-201ENST00000523800 1111 ntBASIC3.29□□□□□ -1.88
HMGXB3Q12766 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.29□□□□□ -1.88
HMGXB3Q12766 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.29□□□□□ -1.88
HMGXB3Q12766 AL139811.1-201ENST00000424779 2299 ntBASIC3.28□□□□□ -1.88
HMGXB3Q12766 SNORA62.2-201ENST00000364672 152 ntBASIC3.28□□□□□ -1.88
HMGXB3Q12766 RN7SKP123-201ENST00000410732 291 ntBASIC3.28□□□□□ -1.88
HMGXB3Q12766 RPL23AP20-201ENST00000447965 421 ntBASIC3.28□□□□□ -1.88
HMGXB3Q12766 AL645939.1-201ENST00000453429 797 ntBASIC3.28□□□□□ -1.88
HMGXB3Q12766 MTCO1P42-201ENST00000457379 726 ntBASIC3.28□□□□□ -1.88
HMGXB3Q12766 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HMGXB3Q12766 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.28□□□□□ -1.89
HMGXB3Q12766 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGXB3Q12766 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGXB3Q12766 HMGB3P15-201ENST00000507326 574 ntBASIC3.27□□□□□ -1.89
HMGXB3Q12766 RNU6-1334P-201ENST00000516032 105 ntBASIC3.27□□□□□ -1.89
HMGXB3Q12766 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGXB3Q12766 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.27□□□□□ -1.89
HMGXB3Q12766 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HMGXB3Q12766 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGXB3Q12766 AL360085.1-201ENST00000604713 532 ntBASIC3.27□□□□□ -1.89
HMGXB3Q12766 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGXB3Q12766 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.27□□□□□ -1.89
HMGXB3Q12766 RNU1-57P-201ENST00000384491 166 ntBASIC3.26□□□□□ -1.89
HMGXB3Q12766 RNA5SP344-201ENST00000411081 104 ntBASIC3.26□□□□□ -1.89
HMGXB3Q12766 RPS7P9-201ENST00000414704 586 ntBASIC3.26□□□□□ -1.89
HMGXB3Q12766 AC013470.3-201ENST00000420252 1194 ntBASIC3.26□□□□□ -1.89
HMGXB3Q12766 AC117532.1-201ENST00000514638 323 ntBASIC3.26□□□□□ -1.89
HMGXB3Q12766 MIR449C-201ENST00000516047 92 ntBASIC3.26□□□□□ -1.89
HMGXB3Q12766 AC073348.1-201ENST00000623002 331 ntBASIC3.26□□□□□ -1.89
HMGXB3Q12766 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.26□□□□□ -1.89
HMGXB3Q12766 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.26□□□□□ -1.89
HMGXB3Q12766 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HMGXB3Q12766 RNA5SP239-201ENST00000410218 129 ntBASIC3.25□□□□□ -1.89
HMGXB3Q12766 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGXB3Q12766 CBX3P4-201ENST00000538909 354 ntBASIC3.25□□□□□ -1.89
HMGXB3Q12766 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.25□□□□□ -1.89
HMGXB3Q12766 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGXB3Q12766 RN7SL622P-201ENST00000585292 275 ntBASIC3.25□□□□□ -1.89
HMGXB3Q12766 AC099778.2-201ENST00000610904 211 ntBASIC3.25□□□□□ -1.89
HMGXB3Q12766 AL137847.3-201ENST00000611521 109 ntBASIC3.25□□□□□ -1.89
HMGXB3Q12766 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGXB3Q12766 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGXB3Q12766 SEPT7P7-201ENST00000420492 1301 ntBASIC3.25□□□□□ -1.89
HMGXB3Q12766 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGXB3Q12766 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
HMGXB3Q12766 BX322784.1-201ENST00000455793 1077 ntBASIC3.24□□□□□ -1.89
HMGXB3Q12766 AC068781.1-201ENST00000488231 618 ntBASIC3.24□□□□□ -1.89
HMGXB3Q12766 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGXB3Q12766 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.24□□□□□ -1.89
HMGXB3Q12766 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HMGXB3Q12766 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HMGXB3Q12766 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGXB3Q12766 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
HMGXB3Q12766 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGXB3Q12766 AP000705.1-201ENST00000454567 350 ntBASIC3.24□□□□□ -1.89
HMGXB3Q12766 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGXB3Q12766 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGXB3Q12766 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.24□□□□□ -1.89
HMGXB3Q12766 AC027514.1-201ENST00000588561 1603 ntBASIC3.23□□□□□ -1.89
HMGXB3Q12766 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
HMGXB3Q12766 AC004965.1-201ENST00000413033 213 ntBASIC3.23□□□□□ -1.89
HMGXB3Q12766 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGXB3Q12766 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGXB3Q12766 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.23□□□□□ -1.89
HMGXB3Q12766 RNA5SP385-201ENST00000515947 110 ntBASIC3.23□□□□□ -1.89
HMGXB3Q12766 MIR3670-2-201ENST00000582974 65 ntBASIC3.23□□□□□ -1.89
HMGXB3Q12766 MIR3670-1-201ENST00000584160 65 ntBASIC3.23□□□□□ -1.89
HMGXB3Q12766 MIR3670-3-201ENST00000584855 65 ntBASIC3.23□□□□□ -1.89
HMGXB3Q12766 uc_338.5-201ENST00000611839 155 ntBASIC3.23□□□□□ -1.89
HMGXB3Q12766 MIR3670-4-201ENST00000612260 65 ntBASIC3.23□□□□□ -1.89
HMGXB3Q12766 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGXB3Q12766 AC010297.1-201ENST00000623948 149 ntBASIC3.23□□□□□ -1.89
HMGXB3Q12766 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGXB3Q12766 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HMGXB3Q12766 MIR365B-201ENST00000362317 111 ntBASIC3.22□□□□□ -1.89
HMGXB3Q12766 DYNLT3P1-201ENST00000378574 347 ntBASIC3.22□□□□□ -1.89
HMGXB3Q12766 RNY1P14-201ENST00000384426 108 ntBASIC3.22□□□□□ -1.89
HMGXB3Q12766 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGXB3Q12766 RNU2-68P-201ENST00000410878 191 ntBASIC3.22□□□□□ -1.89
HMGXB3Q12766 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGXB3Q12766 AC027124.2-201ENST00000428249 105 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms