Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HDAC4P56524 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.01□□□□□ -1.77
HDAC4P56524 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HDAC4P56524 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.01□□□□□ -1.77
HDAC4P56524 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.01□□□□□ -1.77
HDAC4P56524 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HDAC4P56524 ATP8A2P3-201ENST00000426792 1536 ntBASIC4□□□□□ -1.77
HDAC4P56524 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HDAC4P56524 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HDAC4P56524 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4□□□□□ -1.77
HDAC4P56524 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4□□□□□ -1.77
HDAC4P56524 AC024560.2-201ENST00000507981 1497 ntBASIC4□□□□□ -1.77
HDAC4P56524 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HDAC4P56524 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HDAC4P56524 SNORA7.2-201ENST00000364446 145 ntBASIC4□□□□□ -1.77
HDAC4P56524 RNA5SP97-201ENST00000365006 84 ntBASIC4□□□□□ -1.77
HDAC4P56524 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4□□□□□ -1.77
HDAC4P56524 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
HDAC4P56524 RNU6-952P-201ENST00000391164 108 ntBASIC4□□□□□ -1.77
HDAC4P56524 AL031679.1-201ENST00000400616 525 ntBASIC4□□□□□ -1.77
HDAC4P56524 MTHFD2P2-201ENST00000407725 247 ntBASIC4□□□□□ -1.77
HDAC4P56524 NAP1L1P2-201ENST00000414182 1089 ntBASIC4□□□□□ -1.77
HDAC4P56524 TPMTP2-201ENST00000414372 726 ntBASIC4□□□□□ -1.77
HDAC4P56524 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4□□□□□ -1.77
HDAC4P56524 FNDC3CP-201ENST00000420795 1155 ntBASIC4□□□□□ -1.77
HDAC4P56524 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4□□□□□ -1.77
HDAC4P56524 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4□□□□□ -1.77
HDAC4P56524 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4□□□□□ -1.77
HDAC4P56524 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4□□□□□ -1.77
HDAC4P56524 AP000936.2-201ENST00000447151 681 ntBASIC4□□□□□ -1.77
HDAC4P56524 AL500522.2-201ENST00000448562 343 ntBASIC4□□□□□ -1.77
HDAC4P56524 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4□□□□□ -1.77
HDAC4P56524 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4□□□□□ -1.77
HDAC4P56524 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4□□□□□ -1.77
HDAC4P56524 VN1R105P-201ENST00000486595 910 ntBASIC4□□□□□ -1.77
HDAC4P56524 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4□□□□□ -1.77
HDAC4P56524 RAC1P2-201ENST00000511164 579 ntBASIC4□□□□□ -1.77
HDAC4P56524 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4□□□□□ -1.77
HDAC4P56524 SCARNA14-201ENST00000516903 136 ntBASIC4□□□□□ -1.77
HDAC4P56524 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4□□□□□ -1.77
HDAC4P56524 AP004371.1-201ENST00000525240 214 ntBASIC4□□□□□ -1.77
HDAC4P56524 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4□□□□□ -1.77
HDAC4P56524 MTCYBP41-201ENST00000528913 1123 ntBASIC4□□□□□ -1.77
HDAC4P56524 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4□□□□□ -1.77
HDAC4P56524 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4□□□□□ -1.77
HDAC4P56524 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4□□□□□ -1.77
HDAC4P56524 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4□□□□□ -1.77
HDAC4P56524 AC053481.4-201ENST00000583164 216 ntBASIC4□□□□□ -1.77
HDAC4P56524 AC007687.1-201ENST00000602704 304 ntBASIC4□□□□□ -1.77
HDAC4P56524 AC006254.3-201ENST00000603353 884 ntBASIC4□□□□□ -1.77
HDAC4P56524 AC092354.1-201ENST00000606057 376 ntBASIC4□□□□□ -1.77
HDAC4P56524 AC107214.2-201ENST00000608204 634 ntBASIC4□□□□□ -1.77
HDAC4P56524 AC079684.1-201ENST00000621405 437 ntBASIC4□□□□□ -1.77
HDAC4P56524 AC008443.7-201ENST00000622195 246 ntBASIC4□□□□□ -1.77
HDAC4P56524 FP236240.3-201ENST00000623061 327 ntBASIC4□□□□□ -1.77
HDAC4P56524 AC006927.3-201ENST00000638789 384 ntBASIC4□□□□□ -1.77
HDAC4P56524 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4□□□□□ -1.77
HDAC4P56524 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HDAC4P56524 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4□□□□□ -1.77
HDAC4P56524 MTND4P16-201ENST00000466108 1367 ntBASIC4□□□□□ -1.77
HDAC4P56524 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
HDAC4P56524 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4□□□□□ -1.77
HDAC4P56524 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HDAC4P56524 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HDAC4P56524 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HDAC4P56524 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HDAC4P56524 AL022578.1-201ENST00000439330 1433 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 SNORD46.1-201ENST00000364139 104 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.99□□□□□ -1.77
HDAC4P56524 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
HDAC4P56524 CYCSP46-201ENST00000423569 204 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 AL512649.1-201ENST00000428997 581 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 AL512286.1-201ENST00000439244 400 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 MTCO1P27-201ENST00000448269 226 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.99□□□□□ -1.77
HDAC4P56524 SUMO2P2-201ENST00000456482 255 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.99□□□□□ -1.77
HDAC4P56524 RN7SL542P-201ENST00000467147 294 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 RPL31P50-201ENST00000471002 296 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.99□□□□□ -1.77
HDAC4P56524 DSTNP2-201ENST00000504533 515 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 AC006499.5-201ENST00000505037 514 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 RNA5SP208-201ENST00000516156 78 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.99□□□□□ -1.77
HDAC4P56524 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.99□□□□□ -1.77
HDAC4P56524 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.99□□□□□ -1.77
HDAC4P56524 AC103987.3-201ENST00000582071 292 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 AL451064.1-201ENST00000607718 471 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.99□□□□□ -1.77
HDAC4P56524 AC011939.3-201ENST00000613686 466 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 AC004009.2-201ENST00000623016 728 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 NCAPGP1-201ENST00000505112 1814 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 AP001148.1-201ENST00000624124 2359 ntBASIC3.99□□□□□ -1.77
HDAC4P56524 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
HDAC4P56524 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HDAC4P56524 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.98□□□□□ -1.77
HDAC4P56524 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
HDAC4P56524 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.98□□□□□ -1.77
HDAC4P56524 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.98□□□□□ -1.77
HDAC4P56524 PRO1804-201ENST00000623780 2050 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms