Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CXCL1P09341 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CXCL1P09341 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CXCL1P09341 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CXCL1P09341 MIR422A-201ENST00000362286 90 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 RNU6-301P-201ENST00000384277 107 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CXCL1P09341 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CXCL1P09341 CYCSP45-201ENST00000402289 315 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 SNORA11C-201ENST00000408532 129 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 RNU6-712P-201ENST00000410558 100 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.91□□□□□ -2.1
CXCL1P09341 AC008280.1-201ENST00000418851 412 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.91□□□□□ -2.1
CXCL1P09341 MTCO2P17-201ENST00000424336 677 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CXCL1P09341 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.91□□□□□ -2.1
CXCL1P09341 AC098826.1-201ENST00000433943 471 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.91□□□□□ -2.1
CXCL1P09341 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CXCL1P09341 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.91□□□□□ -2.1
CXCL1P09341 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.91□□□□□ -2.1
CXCL1P09341 HSFY3P-201ENST00000444242 1191 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.91□□□□□ -2.1
CXCL1P09341 AC068135.1-201ENST00000446164 246 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AC004022.1-201ENST00000447766 1066 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AC011753.1-201ENST00000451001 220 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.91□□□□□ -2.1
CXCL1P09341 AC010099.1-201ENST00000455434 375 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.91□□□□□ -2.1
CXCL1P09341 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.91□□□□□ -2.1
CXCL1P09341 MLLT10P2-201ENST00000506434 249 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.91□□□□□ -2.1
CXCL1P09341 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.91□□□□□ -2.1
CXCL1P09341 SUB1P1-201ENST00000524415 382 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 OR5AK3P-201ENST00000527486 1297 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 OR4R2P-201ENST00000530815 597 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.91□□□□□ -2.1
CXCL1P09341 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.91□□□□□ -2.1
CXCL1P09341 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.91□□□□□ -2.1
CXCL1P09341 CCNG2P1-201ENST00000549521 1000 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AC103810.1-201ENST00000579873 453 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 MIR5694-201ENST00000581190 76 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.91□□□□□ -2.1
CXCL1P09341 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.91□□□□□ -2.1
CXCL1P09341 AC008739.3-201ENST00000603262 127 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AC106028.5-201ENST00000610332 395 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AC245517.5-201ENST00000611529 162 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 MIR6810-201ENST00000622701 70 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 AL359693.1-201ENST00000614959 2407 ntBASIC1.91□□□□□ -2.1
CXCL1P09341 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
CXCL1P09341 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.9□□□□□ -2.1
CXCL1P09341 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
CXCL1P09341 RNU1-140P-201ENST00000365040 165 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 SET-203ENST00000372688 801 ntTSL 2 BASIC1.9□□□□□ -2.11
CXCL1P09341 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CXCL1P09341 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CXCL1P09341 MIR7-1-201ENST00000384871 110 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.9□□□□□ -2.11
CXCL1P09341 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.9□□□□□ -2.11
CXCL1P09341 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC1.9□□□□□ -2.11
CXCL1P09341 OR6K5P-201ENST00000447050 945 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 SNRPGP6-201ENST00000451124 220 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.9□□□□□ -2.11
CXCL1P09341 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.9□□□□□ -2.11
CXCL1P09341 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.9□□□□□ -2.11
CXCL1P09341 AC104435.1-201ENST00000483483 166 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 AC090096.1-201ENST00000489168 390 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 AC090255.1-201ENST00000495779 349 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 AL358832.1-201ENST00000497800 389 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 GZMAP1-201ENST00000503054 631 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.9□□□□□ -2.11
CXCL1P09341 TTC39CP1-201ENST00000512513 755 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 AP000867.2-201ENST00000532468 320 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.9□□□□□ -2.11
CXCL1P09341 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.9□□□□□ -2.11
CXCL1P09341 AC018618.2-201ENST00000604770 446 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 AC079610.2-201ENST00000604818 690 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 AC242628.1-201ENST00000606810 391 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 AC004775.1-201ENST00000607389 753 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 AC090116.1-201ENST00000615679 446 ntBASIC1.9□□□□□ -2.11
CXCL1P09341 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC1.9□□□□□ -2.11
CXCL1P09341 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
CXCL1P09341 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.9□□□□□ -2.11
CXCL1P09341 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CXCL1P09341 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
CXCL1P09341 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
CXCL1P09341 AC123912.3-201ENST00000600907 1367 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CXCL1P09341 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
CXCL1P09341 RNU6-730P-201ENST00000383954 104 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 RNU6-1074P-201ENST00000383995 104 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 RNU4-52P-201ENST00000384209 138 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 MTND4LP20-201ENST00000402379 270 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 Y_RNA.625-201ENST00000411256 107 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 HMGN2P38-201ENST00000423806 265 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 MORF4L1P7-201ENST00000426038 703 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 AL512649.1-201ENST00000428997 581 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.89□□□□□ -2.11
CXCL1P09341 RNF2P1-201ENST00000442955 1010 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms