Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 OR1S2-201ENST00000302592 978 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 MIR208A-201ENST00000362287 71 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 Y_RNA.31-201ENST00000362574 102 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 RNA5SP387-201ENST00000364226 106 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 RNY3P13-201ENST00000365542 102 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 SNORA70F-201ENST00000384142 135 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 RNU6-1105P-201ENST00000384774 107 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 RNU4-14P-201ENST00000410858 122 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 AL691482.1-201ENST00000453255 87 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 MTCO1P29-201ENST00000496868 288 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 HMGB3P15-201ENST00000507326 574 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 AC018797.3-201ENST00000513388 1241 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 Y_RNA.720-201ENST00000517166 92 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 AC103843.2-201ENST00000530523 682 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 AC007224.1-201ENST00000564410 144 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 MIR4504-201ENST00000577413 92 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 CTHRC1P1-201ENST00000605383 469 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 CYP3A51P-201ENST00000633513 256 ntBASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SYNGAP1Q96PV0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 RBPJP2-201ENST00000618187 1444 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 Z95331.1-201ENST00000623075 23112 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AC011155.1-201ENST00000316512 456 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 RNU6-39P-201ENST00000384344 107 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 U3.30-201ENST00000391308 210 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 MIR548F5-201ENST00000408421 86 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AL590233.1-201ENST00000430017 456 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 HMGB3P11-201ENST00000440127 604 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AC093156.1-201ENST00000440382 670 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 EEF1A1P1-201ENST00000447052 739 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AC107399.1-201ENST00000451226 265 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AC005912.1-201ENST00000495392 255 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AC093303.1-201ENST00000514549 295 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 RNU6-1038P-201ENST00000516516 104 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AC018442.3-201ENST00000523025 183 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 MIR4277-201ENST00000578298 84 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AL355598.1-201ENST00000604169 202 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AL121992.2-201ENST00000606262 256 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AL049794.2-201ENST00000616301 365 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AL122125.1-201ENST00000616999 600 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 AC006484.1-201ENST00000435086 1884 ntBASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SYNGAP1Q96PV0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AC244517.1-201ENST00000606030 2086 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 RN7SKP44-201ENST00000363602 316 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 SNORA62.1-201ENST00000364287 154 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms