Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.78□□□□□ -2.12
SPG11Q96JI7 RNU7-170P-201ENST00000459303 61 ntBASIC1.78□□□□□ -2.12
SPG11Q96JI7 AC017007.3-201ENST00000479865 435 ntBASIC1.78□□□□□ -2.12
SPG11Q96JI7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.78□□□□□ -2.12
SPG11Q96JI7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.78□□□□□ -2.12
SPG11Q96JI7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.78□□□□□ -2.12
SPG11Q96JI7 AP006248.2-201ENST00000623309 592 ntBASIC1.78□□□□□ -2.12
SPG11Q96JI7 AC103988.1-201ENST00000566382 2177 ntBASIC1.78□□□□□ -2.13
SPG11Q96JI7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SPG11Q96JI7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC092427.1-202ENST00000430569 476 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 OR52A4P-203ENST00000498233 1014 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SPG11Q96JI7 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC007620.3-201ENST00000608131 497 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
SPG11Q96JI7 RAD1P1-201ENST00000231383 813 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 Y_RNA.303-201ENST00000364998 94 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.77□□□□□ -2.13
SPG11Q96JI7 AL159169.1-201ENST00000421119 127 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC012498.1-201ENST00000424037 437 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.77□□□□□ -2.13
SPG11Q96JI7 AL589765.3-201ENST00000446084 462 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC079776.3-201ENST00000450665 370 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC007182.2-201ENST00000489251 402 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC007536.1-201ENST00000533382 349 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC091515.1-201ENST00000548110 679 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.77□□□□□ -2.13
SPG11Q96JI7 SULT1C2P1-202ENST00000562418 459 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.77□□□□□ -2.13
SPG11Q96JI7 MIR4303-201ENST00000581299 66 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 CYP3A51P-201ENST00000633513 256 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 AC093591.3-201ENST00000634516 308 ntBASIC1.77□□□□□ -2.13
SPG11Q96JI7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
SPG11Q96JI7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
SPG11Q96JI7 KPNA2P1-201ENST00000458289 1591 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SPG11Q96JI7 RNU6-37P-201ENST00000362692 107 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 RNU6-11P-201ENST00000364234 107 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.76□□□□□ -2.13
SPG11Q96JI7 SNORA51.11-201ENST00000384442 131 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 AL021407.1-201ENST00000404531 386 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 AL354719.1-201ENST00000406535 843 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 RNU7-95P-201ENST00000459222 64 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 DYNLL1P5-201ENST00000467158 270 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 AC011352.3-201ENST00000505162 593 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.76□□□□□ -2.13
SPG11Q96JI7 AC008568.2-201ENST00000623862 2313 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
SPG11Q96JI7 MIR9-3-201ENST00000385084 90 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 OR4K11P-201ENST00000431829 904 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.76□□□□□ -2.13
SPG11Q96JI7 HMGN1P7-201ENST00000491722 313 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 snoZ278.1-201ENST00000517059 112 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 HMGB1P41-201ENST00000520234 440 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 AC025260.1-201ENST00000548858 430 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 AL139286.1-201ENST00000604465 483 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 HMGN2P28-201ENST00000606102 262 ntBASIC1.76□□□□□ -2.13
SPG11Q96JI7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.76□□□□□ -2.13
SPG11Q96JI7 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.75□□□□□ -2.13
SPG11Q96JI7 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SPG11Q96JI7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 AL022400.1-201ENST00000423946 935 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.75□□□□□ -2.13
SPG11Q96JI7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.75□□□□□ -2.13
SPG11Q96JI7 AP001207.1-201ENST00000524051 481 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.75□□□□□ -2.13
SPG11Q96JI7 AP000889.2-201ENST00000532684 490 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.75□□□□□ -2.13
SPG11Q96JI7 AGGF1P8-201ENST00000562979 1000 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.75□□□□□ -2.13
SPG11Q96JI7 MTCO3P13-201ENST00000577757 781 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 AL391646.1-201ENST00000603860 190 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SPG11Q96JI7 XPOTP1-201ENST00000443317 2398 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 AC008264.2-201ENST00000610193 3731 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SPG11Q96JI7 SNORD114-22-201ENST00000365423 72 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 Y_RNA.433-201ENST00000384089 102 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 AL356806.1-201ENST00000422524 916 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 PPP1R2P5-201ENST00000457256 603 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 SNORD13-201ENST00000459299 104 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.75□□□□□ -2.13
SPG11Q96JI7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.75□□□□□ -2.13
SPG11Q96JI7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.75□□□□□ -2.13
SPG11Q96JI7 AC025281.1-201ENST00000567026 265 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 MYL12BP1-201ENST00000569826 507 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 AC120053.1-201ENST00000607706 736 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.75□□□□□ -2.13
SPG11Q96JI7 AC008432.1-201ENST00000615912 1320 ntBASIC1.75□□□□□ -2.13
SPG11Q96JI7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.74□□□□□ -2.13
SPG11Q96JI7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SPG11Q96JI7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SPG11Q96JI7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SPG11Q96JI7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.74□□□□□ -2.13
SPG11Q96JI7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.74□□□□□ -2.13
SPG11Q96JI7 RPL23AP63-201ENST00000498752 471 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms