Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CACNA1EQ15878 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CACNA1EQ15878 XIAPP3-201ENST00000312918 795 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CACNA1EQ15878 SAR1AP2-201ENST00000392696 594 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.94□□□□□ -2.1
CACNA1EQ15878 AL591719.1-201ENST00000444669 744 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 AL049830.2-201ENST00000480072 201 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 AC090543.1-201ENST00000492168 485 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.94□□□□□ -2.1
CACNA1EQ15878 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.94□□□□□ -2.1
CACNA1EQ15878 APOOP1-201ENST00000604695 592 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.94□□□□□ -2.1
CACNA1EQ15878 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.94□□□□□ -2.1
CACNA1EQ15878 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.94□□□□□ -2.1
CACNA1EQ15878 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.94□□□□□ -2.1
CACNA1EQ15878 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
CACNA1EQ15878 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CACNA1EQ15878 RNU6-1320P-201ENST00000390838 107 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 RNU6-1269P-201ENST00000391139 107 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 AC019129.1-201ENST00000403786 261 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 RN7SKP123-201ENST00000410732 291 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 TRAPPC2P10-201ENST00000415662 323 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 AC008173.1-201ENST00000418901 264 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 SAR1AP4-201ENST00000429225 591 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 RNU6-599P-201ENST00000459383 107 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 RNU6-1193P-201ENST00000459461 107 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 RN7SKP234-201ENST00000517173 224 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 AC068446.3-201ENST00000555285 382 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 VN1R80P-201ENST00000597126 338 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 RNU6-368P-201ENST00000620928 107 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 RNU6-538P-201ENST00000622329 107 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 RPL23AP61-201ENST00000623642 466 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 XKRY2-202ENST00000623874 1581 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 XKRY-202ENST00000624960 1581 ntBASIC1.94□□□□□ -2.1
CACNA1EQ15878 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
CACNA1EQ15878 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CACNA1EQ15878 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.93□□□□□ -2.1
CACNA1EQ15878 ZNF355P-201ENST00000427301 3216 ntBASIC1.93□□□□□ -2.1
CACNA1EQ15878 RNA5SP270-201ENST00000411361 118 ntBASIC1.93□□□□□ -2.1
CACNA1EQ15878 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.93□□□□□ -2.1
CACNA1EQ15878 RPL23AP76-201ENST00000441860 458 ntBASIC1.93□□□□□ -2.1
CACNA1EQ15878 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.93□□□□□ -2.1
CACNA1EQ15878 AP000705.1-201ENST00000454567 350 ntBASIC1.93□□□□□ -2.1
CACNA1EQ15878 AC093331.1-201ENST00000521474 169 ntBASIC1.93□□□□□ -2.1
CACNA1EQ15878 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.93□□□□□ -2.1
CACNA1EQ15878 AC073387.2-201ENST00000604797 784 ntBASIC1.93□□□□□ -2.1
CACNA1EQ15878 AL359198.2-201ENST00000611836 194 ntBASIC1.93□□□□□ -2.1
CACNA1EQ15878 AC010297.1-201ENST00000623948 149 ntBASIC1.93□□□□□ -2.1
CACNA1EQ15878 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CACNA1EQ15878 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CACNA1EQ15878 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CACNA1EQ15878 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.93□□□□□ -2.1
CACNA1EQ15878 AL139276.1-201ENST00000311910 1001 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 RNA5SP325-201ENST00000363756 130 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 AC073310.1-201ENST00000423226 1033 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.92□□□□□ -2.1
CACNA1EQ15878 USP9YP7-201ENST00000436723 430 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 RPL23AP58-201ENST00000440453 469 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 USP9YP32-201ENST00000452432 430 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 SNORD13-201ENST00000459299 104 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.92□□□□□ -2.1
CACNA1EQ15878 SNORD116-26-201ENST00000516006 96 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 MIR3670-2-201ENST00000582974 65 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 MIR3670-1-201ENST00000584160 65 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 MIR3670-3-201ENST00000584855 65 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 AL356280.1-201ENST00000603614 379 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 MIR3670-4-201ENST00000612260 65 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.92□□□□□ -2.1
CACNA1EQ15878 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CACNA1EQ15878 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.92□□□□□ -2.1
CACNA1EQ15878 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.92□□□□□ -2.1
CACNA1EQ15878 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.92□□□□□ -2.1
CACNA1EQ15878 U8.10-201ENST00000384260 133 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 RPS7P9-201ENST00000414704 586 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 AP1B1P2-201ENST00000416196 106 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 AL445685.2-201ENST00000422551 342 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.92□□□□□ -2.1
CACNA1EQ15878 AC129850.1-201ENST00000436203 508 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 RPL23AP62-201ENST00000463396 453 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 MLLT10P2-201ENST00000506434 249 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 AC092436.3-201ENST00000511788 257 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.92□□□□□ -2.1
CACNA1EQ15878 AL389895.1-201ENST00000554127 252 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 RPS3AP4-201ENST00000555161 764 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.92□□□□□ -2.1
CACNA1EQ15878 U6.98-201ENST00000637157 84 ntBASIC1.92□□□□□ -2.1
CACNA1EQ15878 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
CACNA1EQ15878 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CACNA1EQ15878 DHFRP5-201ENST00000406944 564 ntBASIC1.91□□□□□ -2.1
CACNA1EQ15878 AC106901.1-201ENST00000425086 698 ntBASIC1.91□□□□□ -2.1
CACNA1EQ15878 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.91□□□□□ -2.1
CACNA1EQ15878 RNA5SP182-201ENST00000516064 82 ntBASIC1.91□□□□□ -2.1
CACNA1EQ15878 HIGD1AP10-201ENST00000527837 282 ntBASIC1.91□□□□□ -2.1
CACNA1EQ15878 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.91□□□□□ -2.1
CACNA1EQ15878 AC025260.1-201ENST00000548858 430 ntBASIC1.91□□□□□ -2.1
CACNA1EQ15878 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.91□□□□□ -2.1
CACNA1EQ15878 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms