Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL645939.1-201ENST00000453429 797 ntBASIC3.28□□□□□ -1.88
CFTRP13569 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.28□□□□□ -1.88
CFTRP13569 RNA5SP385-201ENST00000515947 110 ntBASIC3.28□□□□□ -1.88
CFTRP13569 FAM92A1P1-201ENST00000528023 890 ntBASIC3.28□□□□□ -1.88
CFTRP13569 AC068446.3-201ENST00000555285 382 ntBASIC3.28□□□□□ -1.88
CFTRP13569 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.28□□□□□ -1.88
CFTRP13569 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.28□□□□□ -1.88
CFTRP13569 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.28□□□□□ -1.88
CFTRP13569 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.28□□□□□ -1.88
CFTRP13569 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CFTRP13569 SAR1AP4-201ENST00000429225 591 ntBASIC3.28□□□□□ -1.88
CFTRP13569 ARF4P2-201ENST00000430209 526 ntBASIC3.28□□□□□ -1.88
CFTRP13569 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.28□□□□□ -1.88
CFTRP13569 TAF9P1-201ENST00000445421 515 ntBASIC3.28□□□□□ -1.88
CFTRP13569 TAF9P2-201ENST00000454958 515 ntBASIC3.28□□□□□ -1.88
CFTRP13569 AL049830.2-201ENST00000480072 201 ntBASIC3.28□□□□□ -1.88
CFTRP13569 SUB1P3-201ENST00000564581 315 ntBASIC3.28□□□□□ -1.88
CFTRP13569 AC006254.3-201ENST00000603353 884 ntBASIC3.28□□□□□ -1.88
CFTRP13569 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.28□□□□□ -1.88
CFTRP13569 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CFTRP13569 MIR337-201ENST00000362281 93 ntBASIC3.27□□□□□ -1.89
CFTRP13569 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CFTRP13569 MTCO3P30-201ENST00000426425 670 ntBASIC3.27□□□□□ -1.89
CFTRP13569 AC104564.1-201ENST00000493028 407 ntBASIC3.27□□□□□ -1.89
CFTRP13569 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.27□□□□□ -1.89
CFTRP13569 AC087241.2-201ENST00000535801 324 ntBASIC3.27□□□□□ -1.89
CFTRP13569 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CFTRP13569 AC017076.1-201ENST00000607613 578 ntBASIC3.27□□□□□ -1.89
CFTRP13569 AC073348.1-201ENST00000623002 331 ntBASIC3.27□□□□□ -1.89
CFTRP13569 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CFTRP13569 AL139276.1-201ENST00000311910 1001 ntBASIC3.26□□□□□ -1.89
CFTRP13569 SNORA62.2-201ENST00000364672 152 ntBASIC3.26□□□□□ -1.89
CFTRP13569 RPL7P53-201ENST00000421245 739 ntBASIC3.26□□□□□ -1.89
CFTRP13569 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.26□□□□□ -1.89
CFTRP13569 TMEM248P1-201ENST00000510579 951 ntBASIC3.26□□□□□ -1.89
CFTRP13569 TBCAP3-201ENST00000512475 312 ntBASIC3.26□□□□□ -1.89
CFTRP13569 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.26□□□□□ -1.89
CFTRP13569 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.26□□□□□ -1.89
CFTRP13569 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.26□□□□□ -1.89
CFTRP13569 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CFTRP13569 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.25□□□□□ -1.89
CFTRP13569 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CFTRP13569 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.25□□□□□ -1.89
CFTRP13569 AC027124.2-201ENST00000428249 105 ntBASIC3.25□□□□□ -1.89
CFTRP13569 CR769767.1-201ENST00000436337 346 ntBASIC3.25□□□□□ -1.89
CFTRP13569 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.25□□□□□ -1.89
CFTRP13569 AC243772.1-201ENST00000451620 410 ntBASIC3.25□□□□□ -1.89
CFTRP13569 AP000705.1-201ENST00000454567 350 ntBASIC3.25□□□□□ -1.89
CFTRP13569 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.25□□□□□ -1.89
CFTRP13569 AL159169.2-201ENST00000610061 1269 ntBASIC3.25□□□□□ -1.89
CFTRP13569 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.25□□□□□ -1.89
CFTRP13569 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
CFTRP13569 KPNA2P1-201ENST00000458289 1591 ntBASIC3.25□□□□□ -1.89
CFTRP13569 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.24□□□□□ -1.89
CFTRP13569 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CFTRP13569 SNORD6-201ENST00000365444 73 ntBASIC3.24□□□□□ -1.89
CFTRP13569 RNU6-1263P-201ENST00000384601 106 ntBASIC3.24□□□□□ -1.89
CFTRP13569 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.24□□□□□ -1.89
CFTRP13569 AL163540.1-201ENST00000485382 386 ntBASIC3.24□□□□□ -1.89
CFTRP13569 MLLT10P2-201ENST00000506434 249 ntBASIC3.24□□□□□ -1.89
CFTRP13569 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CFTRP13569 AP003385.6-201ENST00000531603 374 ntBASIC3.24□□□□□ -1.89
CFTRP13569 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.24□□□□□ -1.89
CFTRP13569 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.24□□□□□ -1.89
CFTRP13569 AL137847.3-201ENST00000611521 109 ntBASIC3.24□□□□□ -1.89
CFTRP13569 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.24□□□□□ -1.89
CFTRP13569 CR382285.2-201ENST00000624662 1495 ntBASIC3.24□□□□□ -1.89
CFTRP13569 RNA5SP239-201ENST00000410218 129 ntBASIC3.23□□□□□ -1.89
CFTRP13569 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.23□□□□□ -1.89
CFTRP13569 SEC63P1-201ENST00000425785 1258 ntBASIC3.23□□□□□ -1.89
CFTRP13569 YWHAZP7-201ENST00000436906 631 ntBASIC3.23□□□□□ -1.89
CFTRP13569 RPS29P12-201ENST00000460178 152 ntBASIC3.23□□□□□ -1.89
CFTRP13569 NDUFB4P9-201ENST00000511646 388 ntBASIC3.23□□□□□ -1.89
CFTRP13569 SNORA25.15-201ENST00000516487 89 ntBASIC3.23□□□□□ -1.89
CFTRP13569 RN7SKP82-201ENST00000516786 223 ntBASIC3.23□□□□□ -1.89
CFTRP13569 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CFTRP13569 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.23□□□□□ -1.89
CFTRP13569 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.23□□□□□ -1.89
CFTRP13569 AC004520.1-201ENST00000608362 1413 ntBASIC3.23□□□□□ -1.89
CFTRP13569 AC010297.1-201ENST00000623948 149 ntBASIC3.23□□□□□ -1.89
CFTRP13569 SNORA25.9-201ENST00000365087 128 ntBASIC3.22□□□□□ -1.89
CFTRP13569 Y_RNA.540-201ENST00000384638 111 ntBASIC3.22□□□□□ -1.89
CFTRP13569 MIR518E-201ENST00000385252 88 ntBASIC3.22□□□□□ -1.89
CFTRP13569 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
CFTRP13569 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.22□□□□□ -1.89
CFTRP13569 AL138785.1-201ENST00000425821 331 ntBASIC3.22□□□□□ -1.89
CFTRP13569 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.22□□□□□ -1.89
CFTRP13569 RPS7P5-201ENST00000441482 581 ntBASIC3.22□□□□□ -1.89
CFTRP13569 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.22□□□□□ -1.89
CFTRP13569 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.22□□□□□ -1.89
CFTRP13569 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.22□□□□□ -1.89
CFTRP13569 TRMT112P2-201ENST00000512910 132 ntBASIC3.22□□□□□ -1.89
CFTRP13569 RN7SKP34-201ENST00000516142 244 ntBASIC3.22□□□□□ -1.89
CFTRP13569 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.22□□□□□ -1.89
CFTRP13569 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.22□□□□□ -1.89
CFTRP13569 COX6CP5-201ENST00000527162 228 ntBASIC3.22□□□□□ -1.89
CFTRP13569 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.22□□□□□ -1.89
CFTRP13569 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.22□□□□□ -1.89
CFTRP13569 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.22□□□□□ -1.89
CFTRP13569 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms