Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC3.03□□□□□ -1.92
POLR1AO95602 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
POLR1AO95602 AC012321.1-201ENST00000561622 1588 ntBASIC3.03□□□□□ -1.92
POLR1AO95602 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.03□□□□□ -1.92
POLR1AO95602 U8.10-201ENST00000384260 133 ntBASIC3.02□□□□□ -1.93
POLR1AO95602 MIR499A-201ENST00000384903 122 ntBASIC3.02□□□□□ -1.93
POLR1AO95602 USP9YP8-201ENST00000441913 500 ntBASIC3.02□□□□□ -1.93
POLR1AO95602 AC089999.1-201ENST00000460336 374 ntBASIC3.02□□□□□ -1.93
POLR1AO95602 AC104435.1-201ENST00000483483 166 ntBASIC3.02□□□□□ -1.93
POLR1AO95602 TTC39CP1-201ENST00000512513 755 ntBASIC3.02□□□□□ -1.93
POLR1AO95602 AP000889.2-201ENST00000532684 490 ntBASIC3.02□□□□□ -1.93
POLR1AO95602 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.02□□□□□ -1.93
POLR1AO95602 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.02□□□□□ -1.93
POLR1AO95602 XIST_intron.1-201ENST00000619444 68 ntBASIC3.02□□□□□ -1.93
POLR1AO95602 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
POLR1AO95602 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
POLR1AO95602 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
POLR1AO95602 NEK4P1-201ENST00000433383 879 ntBASIC3.02□□□□□ -1.93
POLR1AO95602 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.02□□□□□ -1.93
POLR1AO95602 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.02□□□□□ -1.93
POLR1AO95602 AC126177.3-201ENST00000551839 688 ntBASIC3.02□□□□□ -1.93
POLR1AO95602 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
POLR1AO95602 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
POLR1AO95602 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
POLR1AO95602 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.01□□□□□ -1.93
POLR1AO95602 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
POLR1AO95602 MIR337-201ENST00000362281 93 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 RNA5SP338-201ENST00000410495 85 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AC104332.2-201ENST00000429959 156 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.01□□□□□ -1.93
POLR1AO95602 AL445646.1-201ENST00000431784 216 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 ATP5F1P1-201ENST00000433775 569 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 RPS27AP18-201ENST00000515536 459 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AC090819.1-201ENST00000523800 1111 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AC110588.1-201ENST00000559699 137 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AC103810.1-201ENST00000579873 453 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.01□□□□□ -1.93
POLR1AO95602 AL670379.6-201ENST00000603753 252 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AL670379.11-201ENST00000604059 253 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AL670379.10-201ENST00000604330 253 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AC008162.1-201ENST00000604718 254 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AL670379.1-201ENST00000604752 252 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AL670379.2-201ENST00000604983 252 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AL670379.5-201ENST00000605253 252 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AL670379.4-201ENST00000605279 254 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AL670379.12-201ENST00000605291 253 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AL670379.8-201ENST00000605353 252 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AL670379.9-201ENST00000605428 253 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AL670379.7-201ENST00000605823 252 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AL451074.6-201ENST00000608512 729 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 CU459211.1-201ENST00000635667 749 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 AL109809.4-201ENST00000603520 2185 ntBASIC3.01□□□□□ -1.93
POLR1AO95602 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
POLR1AO95602 AC107021.2-201ENST00000567714 2095 ntBASIC3□□□□□ -1.93
POLR1AO95602 AL118520.1-201ENST00000450770 291 ntBASIC3□□□□□ -1.93
POLR1AO95602 Y_RNA.670-201ENST00000516255 105 ntBASIC3□□□□□ -1.93
POLR1AO95602 SNORA31.26-201ENST00000517250 137 ntBASIC3□□□□□ -1.93
POLR1AO95602 AC104986.1-201ENST00000517978 436 ntBASIC3□□□□□ -1.93
POLR1AO95602 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3□□□□□ -1.93
POLR1AO95602 AP003385.6-201ENST00000531603 374 ntBASIC3□□□□□ -1.93
POLR1AO95602 USP9YP27-201ENST00000418455 438 ntBASIC2.99□□□□□ -1.93
POLR1AO95602 FNDC3CP-201ENST00000420795 1155 ntBASIC2.99□□□□□ -1.93
POLR1AO95602 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
POLR1AO95602 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.99□□□□□ -1.93
POLR1AO95602 AC003989.2-201ENST00000440224 169 ntBASIC2.99□□□□□ -1.93
POLR1AO95602 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.99□□□□□ -1.93
POLR1AO95602 FAM92A1P1-201ENST00000528023 890 ntBASIC2.99□□□□□ -1.93
POLR1AO95602 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.99□□□□□ -1.93
POLR1AO95602 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.99□□□□□ -1.93
POLR1AO95602 YWHAEP7-203ENST00000622054 312 ntBASIC2.99□□□□□ -1.93
POLR1AO95602 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.99□□□□□ -1.93
POLR1AO95602 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
POLR1AO95602 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.99□□□□□ -1.93
POLR1AO95602 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
POLR1AO95602 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
POLR1AO95602 RNU4-62P-201ENST00000410125 130 ntBASIC2.99□□□□□ -1.93
POLR1AO95602 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
POLR1AO95602 SDR42E1P3-201ENST00000438345 502 ntBASIC2.99□□□□□ -1.93
POLR1AO95602 AC005840.1-201ENST00000498412 377 ntBASIC2.99□□□□□ -1.93
POLR1AO95602 DNAJC19P9-201ENST00000555084 351 ntBASIC2.99□□□□□ -1.93
POLR1AO95602 AC002064.3-201ENST00000623448 346 ntBASIC2.99□□□□□ -1.93
POLR1AO95602 OR5AQ1P-203ENST00000641818 1529 ntBASIC2.98□□□□□ -1.93
POLR1AO95602 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
POLR1AO95602 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
POLR1AO95602 FGF7P8-201ENST00000402994 292 ntBASIC2.98□□□□□ -1.93
POLR1AO95602 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.98□□□□□ -1.93
POLR1AO95602 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.98□□□□□ -1.93
POLR1AO95602 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.98□□□□□ -1.93
POLR1AO95602 RSL24D1P2-201ENST00000445584 366 ntBASIC2.98□□□□□ -1.93
POLR1AO95602 RPL23AP7-203ENST00000449021 469 ntBASIC2.98□□□□□ -1.93
POLR1AO95602 AL109741.2-201ENST00000455561 343 ntBASIC2.98□□□□□ -1.93
POLR1AO95602 AC078918.1-201ENST00000498515 228 ntBASIC2.98□□□□□ -1.93
POLR1AO95602 TRAV31-201ENST00000502780 342 ntBASIC2.98□□□□□ -1.93
POLR1AO95602 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.98□□□□□ -1.93
POLR1AO95602 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.98□□□□□ -1.93
POLR1AO95602 ISCA1P3-201ENST00000577104 373 ntBASIC2.98□□□□□ -1.93
POLR1AO95602 OR1S1-201ENST00000624470 978 ntBASIC2.98□□□□□ -1.93
POLR1AO95602 AL606537.1-201ENST00000607258 2011 ntBASIC2.98□□□□□ -1.93
POLR1AO95602 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
POLR1AO95602 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms