Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC091826.1-201ENST00000514065 313 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 SNORA9.3-201ENST00000516383 129 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC124293.1-201ENST00000530034 493 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AP000916.1-201ENST00000533869 835 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC079148.1-201ENST00000565944 819 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC074051.3-201ENST00000570238 358 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AL020997.3-201ENST00000602843 359 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AL671309.1-201ENST00000603750 544 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC005046.1-201ENST00000608515 625 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC069234.5-201ENST00000611056 416 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC090116.1-201ENST00000615679 446 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AL445493.3-201ENST00000619568 477 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC007275.1-201ENST00000621243 671 ntBASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.8□□□□□ -1.96
TREX1Q9NSU2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC108206.1-201ENST00000570186 4159 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 RNU1-140P-201ENST00000365040 165 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 RNU6-339P-201ENST00000384310 107 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 MIR649-201ENST00000384843 97 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 RPL21P75-201ENST00000396599 483 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 RPL21P28-201ENST00000401418 483 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AL592114.1-201ENST00000403842 483 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 MIR1289-1-201ENST00000408836 144 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 RNA5SP38-201ENST00000410750 119 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 EEF1A1P41-201ENST00000414667 207 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 RPL23AP83-201ENST00000434984 473 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.79□□□□□ -1.96
TREX1Q9NSU2 RPL21P39-201ENST00000463605 483 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC011979.1-201ENST00000472300 483 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 RPL21P93-201ENST00000480465 489 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC233702.1-201ENST00000482905 502 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC087190.1-201ENST00000484462 480 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC093591.1-201ENST00000491435 481 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 RPL21P16-201ENST00000495531 483 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC026412.2-201ENST00000512270 1075 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC011611.5-201ENST00000552477 578 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AL355836.1-201ENST00000555951 870 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.79□□□□□ -1.96
TREX1Q9NSU2 NIFKP8-201ENST00000560500 874 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.79□□□□□ -1.96
TREX1Q9NSU2 BPTFP1-201ENST00000579209 492 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC092474.3-201ENST00000603022 568 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC128687.1-201ENST00000605304 619 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AP004247.3-201ENST00000608682 624 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC004696.1-201ENST00000614345 607 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AL118556.2-201ENST00000614375 824 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AL162274.2-201ENST00000614406 332 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 MIR6076-201ENST00000617521 113 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC068722.2-201ENST00000618734 544 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 AC098679.5-201ENST00000624394 571 ntBASIC2.79□□□□□ -1.96
TREX1Q9NSU2 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 MTND5P31-201ENST00000419366 1374 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 RNA5SP258-201ENST00000362750 119 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 SNORA70.4-201ENST00000365509 134 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 RNU6-761P-201ENST00000384148 107 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 SNORA44-201ENST00000384584 132 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 SNORD65C-201ENST00000390962 71 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 FAT1P1-201ENST00000406588 507 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 AL606495.1-201ENST00000422100 813 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 AC233981.1-201ENST00000423224 461 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 UBE2D3P2-201ENST00000424409 445 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 UBE2V1P6-201ENST00000430840 422 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 HSFY3P-201ENST00000444242 1191 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 Z96811.1-201ENST00000445880 108 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 AL096803.2-201ENST00000450032 677 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 NAP1L1P3-201ENST00000462291 880 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 RPL23AP11-201ENST00000475260 469 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 AC103975.1-201ENST00000482506 483 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 HIGD1AP13-201ENST00000509878 289 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 PRELID3BP4-201ENST00000515476 571 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 AL133271.1-201ENST00000538229 291 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 SNRPGP1-201ENST00000553864 222 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.78□□□□□ -1.96
TREX1Q9NSU2 ZNF861P-201ENST00000588126 639 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 AC091057.2-201ENST00000602594 792 ntBASIC2.78□□□□□ -1.96
TREX1Q9NSU2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms