Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 OR5J1P-201ENST00000313544 939 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 RNA5SP22-201ENST00000365393 109 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 RNA5SP151-201ENST00000365632 117 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 RNU6-432P-201ENST00000384196 109 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AP000567.1-201ENST00000406413 156 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 SPA17P1-201ENST00000416656 452 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 RPS17P8-201ENST00000434525 335 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 snoU109.1-201ENST00000459339 135 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AC104763.1-201ENST00000475274 360 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 HSPE1P6-201ENST00000479457 291 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AC011825.1-201ENST00000484967 388 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 RN7SKP13-201ENST00000515933 244 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 CCNG2P1-201ENST00000549521 1000 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AL133153.1-201ENST00000557756 303 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 HSPE1P5-201ENST00000561489 272 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 COX6CP3-201ENST00000580869 223 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AC079089.3-201ENST00000603094 673 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AC020910.3-201ENST00000603701 874 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AC106900.2-201ENST00000604994 317 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 NDUFA8P1-201ENST00000605525 367 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AL121932.1-201ENST00000605542 214 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 RNU6-87P-201ENST00000607561 108 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AP001521.2-201ENST00000608772 546 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AP002826.1-201ENST00000608835 315 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.39□□□□□ -1.71
PPP4R4Q6NUP7 AC139769.1-204ENST00000472297 1931 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 SNORA36C-201ENST00000384289 132 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 RPL27AP8-201ENST00000424277 446 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AC010975.2-201ENST00000427781 588 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 TIMM9P1-201ENST00000436122 256 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 TXNP1-201ENST00000441872 371 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AL162389.1-201ENST00000449233 177 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AL451050.1-201ENST00000450126 415 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AC006499.6-201ENST00000511169 607 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 SNORA18.6-201ENST00000516792 115 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AP000857.1-201ENST00000532151 543 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AC133555.2-201ENST00000550213 292 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AP005205.1-201ENST00000563503 508 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 MIR4700-201ENST00000578311 74 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 MIR3146-201ENST00000580367 79 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AC006116.10-201ENST00000591836 581 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AC007038.2-201ENST00000608095 740 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AL136295.6-201ENST00000610486 658 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 MIR4727-201ENST00000622232 55 ntBASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.38□□□□□ -1.71
PPP4R4Q6NUP7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms