Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC011451.2-201ENST00000604303 598 ntBASIC3.86□□□□□ -1.79
HADHAP40939 AL034351.1-201ENST00000605288 668 ntBASIC3.86□□□□□ -1.79
HADHAP40939 BRDTP1-201ENST00000605735 677 ntBASIC3.86□□□□□ -1.79
HADHAP40939 AC024560.3-201ENST00000608482 349 ntBASIC3.86□□□□□ -1.79
HADHAP40939 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.86□□□□□ -1.79
HADHAP40939 AC009039.2-201ENST00000624524 529 ntBASIC3.86□□□□□ -1.79
HADHAP40939 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.86□□□□□ -1.79
HADHAP40939 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HADHAP40939 AC138915.3-201ENST00000562908 1389 ntBASIC3.86□□□□□ -1.79
HADHAP40939 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HADHAP40939 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HADHAP40939 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.85□□□□□ -1.79
HADHAP40939 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HADHAP40939 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.85□□□□□ -1.79
HADHAP40939 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HADHAP40939 RNU6-173P-201ENST00000364215 104 ntBASIC3.85□□□□□ -1.79
HADHAP40939 RNU6-343P-201ENST00000364709 104 ntBASIC3.85□□□□□ -1.79
HADHAP40939 RNA5SP88-201ENST00000365560 109 ntBASIC3.85□□□□□ -1.79
HADHAP40939 RNU6-723P-201ENST00000383973 107 ntBASIC3.85□□□□□ -1.79
HADHAP40939 AL590084.2-201ENST00000401481 382 ntBASIC3.85□□□□□ -1.79
HADHAP40939 RNU2-47P-201ENST00000410649 186 ntBASIC3.85□□□□□ -1.79
HADHAP40939 RAP1BP1-201ENST00000412709 553 ntBASIC3.85□□□□□ -1.79
HADHAP40939 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.85□□□□□ -1.79
HADHAP40939 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.85□□□□□ -1.79
HADHAP40939 MTCYBP45-201ENST00000435243 565 ntBASIC3.85□□□□□ -1.79
HADHAP40939 OR6K5P-201ENST00000447050 945 ntBASIC3.85□□□□□ -1.79
HADHAP40939 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.85□□□□□ -1.79
HADHAP40939 MTND1P31-201ENST00000449206 961 ntBASIC3.85□□□□□ -1.79
HADHAP40939 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.85□□□□□ -1.79
HADHAP40939 NANOGP10-201ENST00000453325 895 ntBASIC3.85□□□□□ -1.79
HADHAP40939 MTCO3P16-201ENST00000454456 754 ntBASIC3.85□□□□□ -1.79
HADHAP40939 SNORD121B-201ENST00000458838 81 ntBASIC3.85□□□□□ -1.79
HADHAP40939 AC084198.1-201ENST00000477747 402 ntBASIC3.85□□□□□ -1.79
HADHAP40939 TRBV12-2-201ENST00000489763 344 ntBASIC3.85□□□□□ -1.79
HADHAP40939 RPL7P23-201ENST00000493874 747 ntBASIC3.85□□□□□ -1.79
HADHAP40939 KLHL2P1-201ENST00000508691 521 ntBASIC3.85□□□□□ -1.79
HADHAP40939 MTND1P22-201ENST00000510572 951 ntBASIC3.85□□□□□ -1.79
HADHAP40939 NPM1P41-201ENST00000512920 831 ntBASIC3.85□□□□□ -1.79
HADHAP40939 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.85□□□□□ -1.79
HADHAP40939 RNU6-678P-201ENST00000516832 109 ntBASIC3.85□□□□□ -1.79
HADHAP40939 RNU6-714P-201ENST00000516963 103 ntBASIC3.85□□□□□ -1.79
HADHAP40939 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HADHAP40939 OR7K1P-201ENST00000546439 926 ntBASIC3.85□□□□□ -1.79
HADHAP40939 ZNF321P-202ENST00000550843 495 ntBASIC3.85□□□□□ -1.79
HADHAP40939 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.85□□□□□ -1.79
HADHAP40939 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HADHAP40939 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.85□□□□□ -1.79
HADHAP40939 AP000811.1-201ENST00000603803 651 ntBASIC3.85□□□□□ -1.79
HADHAP40939 AL607023.1-201ENST00000620045 248 ntBASIC3.85□□□□□ -1.79
HADHAP40939 AL353748.2-201ENST00000622148 471 ntBASIC3.85□□□□□ -1.79
HADHAP40939 AC073530.2-201ENST00000623987 261 ntBASIC3.85□□□□□ -1.79
HADHAP40939 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HADHAP40939 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HADHAP40939 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.85□□□□□ -1.79
HADHAP40939 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HADHAP40939 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
HADHAP40939 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HADHAP40939 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.84□□□□□ -1.79
HADHAP40939 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HADHAP40939 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HADHAP40939 FRG1BP-201ENST00000278882 761 ntBASIC3.84□□□□□ -1.79
HADHAP40939 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
HADHAP40939 RNU6-50P-201ENST00000362356 103 ntBASIC3.84□□□□□ -1.79
HADHAP40939 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.84□□□□□ -1.79
HADHAP40939 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
HADHAP40939 MIR554-201ENST00000384874 96 ntBASIC3.84□□□□□ -1.79
HADHAP40939 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HADHAP40939 AL049545.1-201ENST00000401856 572 ntBASIC3.84□□□□□ -1.79
HADHAP40939 MIR1305-201ENST00000408300 86 ntBASIC3.84□□□□□ -1.79
HADHAP40939 SNORA3.3-201ENST00000408712 125 ntBASIC3.84□□□□□ -1.79
HADHAP40939 RNA5SP129-201ENST00000410276 118 ntBASIC3.84□□□□□ -1.79
HADHAP40939 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.84□□□□□ -1.79
HADHAP40939 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HADHAP40939 AL159169.1-201ENST00000421119 127 ntBASIC3.84□□□□□ -1.79
HADHAP40939 MTND5P25-201ENST00000430499 799 ntBASIC3.84□□□□□ -1.79
HADHAP40939 SKP1P1-201ENST00000438081 489 ntBASIC3.84□□□□□ -1.79
HADHAP40939 AC004866.2-201ENST00000438285 481 ntBASIC3.84□□□□□ -1.79
HADHAP40939 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.84□□□□□ -1.79
HADHAP40939 AC108734.1-201ENST00000439549 399 ntBASIC3.84□□□□□ -1.79
HADHAP40939 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.84□□□□□ -1.79
HADHAP40939 RNU7-170P-201ENST00000459303 61 ntBASIC3.84□□□□□ -1.79
HADHAP40939 OR9M1P-201ENST00000459641 921 ntBASIC3.84□□□□□ -1.79
HADHAP40939 AC106872.3-201ENST00000495104 446 ntBASIC3.84□□□□□ -1.79
HADHAP40939 AP002812.1-201ENST00000495378 474 ntBASIC3.84□□□□□ -1.79
HADHAP40939 SLC25A15P5-201ENST00000508033 253 ntBASIC3.84□□□□□ -1.79
HADHAP40939 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.84□□□□□ -1.79
HADHAP40939 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.84□□□□□ -1.79
HADHAP40939 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HADHAP40939 MTCYBP43-201ENST00000513621 740 ntBASIC3.84□□□□□ -1.79
HADHAP40939 RNU6-1129P-201ENST00000515964 104 ntBASIC3.84□□□□□ -1.79
HADHAP40939 RN7SKP83-201ENST00000516512 178 ntBASIC3.84□□□□□ -1.79
HADHAP40939 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.84□□□□□ -1.79
HADHAP40939 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.84□□□□□ -1.79
HADHAP40939 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.84□□□□□ -1.79
HADHAP40939 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HADHAP40939 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
HADHAP40939 CYCSP30-201ENST00000546447 172 ntBASIC3.84□□□□□ -1.79
HADHAP40939 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.84□□□□□ -1.79
HADHAP40939 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.84□□□□□ -1.79
HADHAP40939 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms