Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 MTCO3P11-201ENST00000455103 774 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 RN7SL93P-201ENST00000463035 293 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TM4SF1P30408 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.11□□□□□ -1.75
TM4SF1P30408 SNORA3.4-201ENST00000515969 96 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.11□□□□□ -1.75
TM4SF1P30408 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.11□□□□□ -1.75
TM4SF1P30408 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.11□□□□□ -1.75
TM4SF1P30408 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.11□□□□□ -1.75
TM4SF1P30408 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.11□□□□□ -1.75
TM4SF1P30408 AL139174.1-201ENST00000531489 886 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.11□□□□□ -1.75
TM4SF1P30408 MIR2682-201ENST00000580305 110 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 SNORD84-203ENST00000584275 78 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 AC116312.1-201ENST00000606841 314 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 AC022149.2-201ENST00000621061 203 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.11□□□□□ -1.75
TM4SF1P30408 AP000676.4-201ENST00000624659 623 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 CR381572.1-201ENST00000625098 102 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TM4SF1P30408 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TM4SF1P30408 OR11H5P-202ENST00000641612 1325 ntBASIC4.11□□□□□ -1.75
TM4SF1P30408 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TM4SF1P30408 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TM4SF1P30408 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.11□□□□□ -1.75
TM4SF1P30408 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TM4SF1P30408 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.1□□□□□ -1.75
TM4SF1P30408 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TM4SF1P30408 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TM4SF1P30408 RNU1-70P-201ENST00000362618 164 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 RNU6-335P-201ENST00000364563 113 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 TAS2R15P-201ENST00000390674 928 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 AL391417.1-201ENST00000404100 426 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 RNU2-15P-201ENST00000410692 191 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 RNA5SP104-201ENST00000410989 118 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.1□□□□□ -1.75
TM4SF1P30408 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.1□□□□□ -1.75
TM4SF1P30408 AL008987.1-201ENST00000415528 237 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.1□□□□□ -1.75
TM4SF1P30408 AC019178.2-201ENST00000423595 505 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.1□□□□□ -1.75
TM4SF1P30408 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.1□□□□□ -1.75
TM4SF1P30408 RPL21P112-201ENST00000434403 463 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 RPS25P9-201ENST00000435591 252 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 SETP5-201ENST00000437270 562 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 ELOCP13-201ENST00000443934 329 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.1□□□□□ -1.75
TM4SF1P30408 SNRPGP5-201ENST00000456003 220 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.1□□□□□ -1.75
TM4SF1P30408 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.1□□□□□ -1.75
TM4SF1P30408 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TM4SF1P30408 HSPA8P13-201ENST00000523715 472 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.1□□□□□ -1.75
TM4SF1P30408 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.1□□□□□ -1.75
TM4SF1P30408 AC009097.3-201ENST00000563557 1018 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.1□□□□□ -1.75
TM4SF1P30408 AL354943.1-201ENST00000572103 781 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.1□□□□□ -1.75
TM4SF1P30408 AC245036.5-201ENST00000596330 847 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 AC007998.5-201ENST00000622938 237 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 AC027287.1-201ENST00000553115 1453 ntBASIC4.1□□□□□ -1.75
TM4SF1P30408 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.1□□□□□ -1.75
TM4SF1P30408 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TM4SF1P30408 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TM4SF1P30408 RNU6-83P-201ENST00000384568 112 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 HMGB1P17-201ENST00000403495 628 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 RNA5SP39-201ENST00000411245 120 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 USP9YP33-201ENST00000412220 421 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 MTCO3P12-201ENST00000416718 547 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 MTATP6P27-201ENST00000416987 621 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.09□□□□□ -1.75
TM4SF1P30408 AC244098.2-201ENST00000422068 99 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 AL513174.1-201ENST00000423182 629 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.09□□□□□ -1.75
TM4SF1P30408 NANOGP6-201ENST00000429190 847 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 USP9YP35-201ENST00000435696 412 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 AL357552.1-201ENST00000445254 415 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 EXTL2P1-201ENST00000446218 416 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 HMGN2P21-201ENST00000447764 270 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 ARPC3P5-201ENST00000448802 534 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.09□□□□□ -1.75
TM4SF1P30408 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.09□□□□□ -1.75
TM4SF1P30408 SUMO2P2-201ENST00000456482 255 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 MTND2P14-201ENST00000482139 351 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 RPS3AP50-201ENST00000487064 803 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 MTCYBP17-201ENST00000503579 789 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.09□□□□□ -1.75
TM4SF1P30408 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.09□□□□□ -1.75
TM4SF1P30408 RNY4P37-201ENST00000516225 96 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 AP004371.1-201ENST00000525240 214 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.09□□□□□ -1.75
TM4SF1P30408 AC087276.1-201ENST00000529659 480 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 OR5AP1P-201ENST00000529730 940 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 AC135001.1-201ENST00000544546 283 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 LARP7P2-201ENST00000575306 125 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 UBL5P2-201ENST00000583788 219 ntBASIC4.09□□□□□ -1.75
TM4SF1P30408 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.09□□□□□ -1.75
TM4SF1P30408 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.09□□□□□ -1.75
TM4SF1P30408 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms