Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXN1O15353 RPS7P15-201ENST00000415804 584 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 AL161631.1-201ENST00000417933 486 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.78□□□□□ -1.64
FOXN1O15353 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXN1O15353 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXN1O15353 AC073464.1-201ENST00000429823 534 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 ZYG11AP1-201ENST00000430329 837 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN1O15353 ARPC3P1-201ENST00000437218 533 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXN1O15353 MTND4P19-201ENST00000446659 478 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 COX6CP18-201ENST00000448769 222 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXN1O15353 RPS20P24-201ENST00000457473 361 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 RPL38P1-201ENST00000460914 211 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 RN7SL807P-201ENST00000470923 297 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 AP000797.1-201ENST00000478870 387 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 SETP14-201ENST00000497538 873 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 UBE2CP3-201ENST00000502715 450 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.78□□□□□ -1.64
FOXN1O15353 MTCO3P9-201ENST00000506989 781 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 AC114786.4-201ENST00000508771 728 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN1O15353 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXN1O15353 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXN1O15353 AP002748.2-201ENST00000528671 348 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN1O15353 AK6P1-201ENST00000540219 478 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.78□□□□□ -1.64
FOXN1O15353 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXN1O15353 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN1O15353 AC022655.2-201ENST00000577280 318 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 AC020914.6-201ENST00000594327 272 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 AL451049.1-201ENST00000608672 497 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 AC006840.1-201ENST00000623069 542 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 AC112487.2-201ENST00000637950 304 ntBASIC4.78□□□□□ -1.64
FOXN1O15353 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN1O15353 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
FOXN1O15353 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXN1O15353 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
FOXN1O15353 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
FOXN1O15353 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXN1O15353 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
FOXN1O15353 Z99496.1-201ENST00000469424 1477 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 SCN1A-220ENST00000641603 12506 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
FOXN1O15353 RNA5SP126-201ENST00000365092 109 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
FOXN1O15353 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN1O15353 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXN1O15353 AC097713.2-201ENST00000430199 356 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 RPL23AP89-201ENST00000439324 255 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN1O15353 BX322784.1-201ENST00000455793 1077 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.77□□□□□ -1.65
FOXN1O15353 LARP1BP2-201ENST00000486594 519 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 AC019235.1-201ENST00000503847 207 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.77□□□□□ -1.65
FOXN1O15353 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN1O15353 AC010486.1-201ENST00000511793 424 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN1O15353 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN1O15353 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN1O15353 AC069240.1-201ENST00000548774 375 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN1O15353 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN1O15353 AC005261.5-201ENST00000596280 355 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXN1O15353 AC012603.1-201ENST00000606424 528 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXN1O15353 AL020991.1-201ENST00000612314 373 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN1O15353 STMN1P1-201ENST00000617809 440 ntBASIC4.77□□□□□ -1.65
FOXN1O15353 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
FOXN1O15353 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXN1O15353 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
FOXN1O15353 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.77□□□□□ -1.65
FOXN1O15353 SRP72P2-201ENST00000344851 1979 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.76□□□□□ -1.65
FOXN1O15353 RNU5F-6P-201ENST00000362979 116 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 RNU4-73P-201ENST00000363164 141 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 Y_RNA.295-201ENST00000364918 102 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 Y_RNA.356-201ENST00000365475 113 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 MTCO3P40-201ENST00000392516 676 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.76□□□□□ -1.65
FOXN1O15353 FAT1P1-201ENST00000406588 507 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 RNA5SP296-201ENST00000410523 111 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 USP9YP13-201ENST00000417797 480 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.76□□□□□ -1.65
FOXN1O15353 AC093698.1-201ENST00000423843 571 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXN1O15353 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXN1O15353 AC104850.1-201ENST00000435940 476 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 RPL23AP46-201ENST00000438548 490 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 AL022578.1-201ENST00000439330 1433 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 AC093019.1-201ENST00000443135 252 ntBASIC4.76□□□□□ -1.65
FOXN1O15353 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.76□□□□□ -1.65
FOXN1O15353 AL033528.1-201ENST00000453780 140 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms