Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 OR10AB1P-201ENST00000609613 938 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AL157817.1-201ENST00000614264 790 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC079395.3-201ENST00000615161 484 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AL355480.4-201ENST00000626823 69 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC004808.2-201ENST00000627965 773 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AL365361.1-201ENST00000566942 3481 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 POMP-202ENST00000460403 1428 ntTSL 3 BASIC1.4□□□□□ -2.18
CDC42SE1Q9NRR8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
CDC42SE1Q9NRR8 MTCO1P23-201ENST00000415223 1526 ntBASIC1.4□□□□□ -2.18
CDC42SE1Q9NRR8 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CDC42SE1Q9NRR8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CDC42SE1Q9NRR8 ZNF720P1-201ENST00000562403 1939 ntBASIC1.4□□□□□ -2.18
CDC42SE1Q9NRR8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC016769.3-201ENST00000396562 315 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 CYB5AP4-201ENST00000396692 399 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AL122016.1-201ENST00000403365 367 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC245052.5-201ENST00000416320 649 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC093162.1-201ENST00000419682 124 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC098614.2-201ENST00000426040 255 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC104837.2-201ENST00000427236 424 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 MYL8P-204ENST00000431574 518 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 BTF3P10-201ENST00000433415 495 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AL022324.2-201ENST00000434827 780 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 ARF4P4-201ENST00000439608 520 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 RPL26P6-201ENST00000440913 438 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 FGF7P5-201ENST00000441829 291 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AL050341.1-201ENST00000447743 313 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC005532.2-201ENST00000467154 373 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC011005.3-201ENST00000491624 395 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 COL6A4P2-205ENST00000509855 506 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC113191.1-201ENST00000517759 403 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 ATP5F1P5-201ENST00000526403 760 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AP000676.2-201ENST00000529711 301 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC008033.2-201ENST00000542626 177 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 MIR3616-201ENST00000584070 92 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC119501.1-201ENST00000603646 475 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC013553.2-201ENST00000604244 589 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC115286.1-201ENST00000604298 434 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC002487.1-201ENST00000604565 994 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AL096712.1-201ENST00000614561 159 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 RMST_10.1-201ENST00000616309 154 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AL355493.4-201ENST00000618530 292 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC068870.2-201ENST00000620635 389 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC010872.1-201ENST00000624225 675 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 AC010608.2-201ENST00000624830 470 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 GDI2P1-201ENST00000429312 1336 ntBASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CDC42SE1Q9NRR8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 HSPE1P11-201ENST00000339579 310 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 OR56A5-201ENST00000340110 738 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 SNORD113.2-201ENST00000364166 89 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 IARS-201ENST00000375627 697 ntTSL 3 BASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 MIR223-201ENST00000385204 110 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 MIR301B-201ENST00000390813 78 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 OR7E156P-201ENST00000400303 464 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 MIR1193-201ENST00000408109 78 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 SNORA11.3-201ENST00000408471 128 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 RNU2-47P-201ENST00000410649 186 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 COX6B1P1-201ENST00000415962 213 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 RPLP0P7-201ENST00000416050 667 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 COTL1P1-201ENST00000422309 375 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 NDUFB4P7-201ENST00000423198 363 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 AL355994.1-201ENST00000424379 260 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 VN1R42P-201ENST00000424651 344 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 RPL7P44-201ENST00000424827 742 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 AL358075.3-201ENST00000426289 226 ntBASIC1.39□□□□□ -2.19
CDC42SE1Q9NRR8 RSL24D1P6-201ENST00000426934 401 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms