Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.3□□□□□ -2.04
SRP9P49458 RNA5SP82-201ENST00000516707 92 ntBASIC2.3□□□□□ -2.04
SRP9P49458 RNA5SP402-201ENST00000517148 110 ntBASIC2.3□□□□□ -2.04
SRP9P49458 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.3□□□□□ -2.04
SRP9P49458 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.3□□□□□ -2.04
SRP9P49458 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.3□□□□□ -2.04
SRP9P49458 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.3□□□□□ -2.04
SRP9P49458 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
SRP9P49458 FAM60CP-201ENST00000591086 664 ntBASIC2.3□□□□□ -2.04
SRP9P49458 TPMTP1-201ENST00000592307 737 ntBASIC2.3□□□□□ -2.04
SRP9P49458 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SRP9P49458 TAB3P1-202ENST00000452645 1634 ntBASIC2.3□□□□□ -2.04
SRP9P49458 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
SRP9P49458 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.3□□□□□ -2.04
SRP9P49458 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SRP9P49458 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.29□□□□□ -2.04
SRP9P49458 CUL1P1-201ENST00000509510 2425 ntBASIC2.29□□□□□ -2.04
SRP9P49458 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SRP9P49458 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.29□□□□□ -2.04
SRP9P49458 RNU6-859P-201ENST00000362728 107 ntBASIC2.29□□□□□ -2.04
SRP9P49458 SNORA5B-201ENST00000363786 132 ntBASIC2.29□□□□□ -2.04
SRP9P49458 SNORA80A-201ENST00000363922 136 ntBASIC2.29□□□□□ -2.04
SRP9P49458 RNVU1-3-201ENST00000364313 161 ntBASIC2.29□□□□□ -2.04
SRP9P49458 AC007064.1-201ENST00000412238 351 ntBASIC2.29□□□□□ -2.04
SRP9P49458 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.29□□□□□ -2.04
SRP9P49458 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.29□□□□□ -2.04
SRP9P49458 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.29□□□□□ -2.04
SRP9P49458 HMGB1P26-201ENST00000452520 628 ntBASIC2.29□□□□□ -2.04
SRP9P49458 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.29□□□□□ -2.04
SRP9P49458 AC096576.1-201ENST00000489014 359 ntBASIC2.29□□□□□ -2.04
SRP9P49458 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.29□□□□□ -2.04
SRP9P49458 AC096725.1-201ENST00000514266 313 ntBASIC2.29□□□□□ -2.04
SRP9P49458 RNU6-1004P-201ENST00000516584 111 ntBASIC2.29□□□□□ -2.04
SRP9P49458 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.29□□□□□ -2.04
SRP9P49458 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.29□□□□□ -2.04
SRP9P49458 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.29□□□□□ -2.04
SRP9P49458 AC007115.1-201ENST00000546853 234 ntBASIC2.29□□□□□ -2.04
SRP9P49458 AC007954.1-201ENST00000554198 494 ntBASIC2.29□□□□□ -2.04
SRP9P49458 AL049874.4-201ENST00000557593 255 ntBASIC2.29□□□□□ -2.04
SRP9P49458 AC103810.1-201ENST00000579873 453 ntBASIC2.29□□□□□ -2.04
SRP9P49458 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.29□□□□□ -2.04
SRP9P49458 AL009028.1-201ENST00000604895 802 ntBASIC2.29□□□□□ -2.04
SRP9P49458 ATP1B3P1-201ENST00000605365 821 ntBASIC2.29□□□□□ -2.04
SRP9P49458 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SRP9P49458 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.29□□□□□ -2.04
SRP9P49458 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.29□□□□□ -2.04
SRP9P49458 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SRP9P49458 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SRP9P49458 AL359693.1-201ENST00000614959 2407 ntBASIC2.28□□□□□ -2.04
SRP9P49458 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
SRP9P49458 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SRP9P49458 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SRP9P49458 RNU6-185P-201ENST00000384421 107 ntBASIC2.28□□□□□ -2.04
SRP9P49458 MIR142-201ENST00000384835 87 ntBASIC2.28□□□□□ -2.04
SRP9P49458 TAS2R15P-201ENST00000390674 928 ntBASIC2.28□□□□□ -2.04
SRP9P49458 RNU6-837P-201ENST00000391056 108 ntBASIC2.28□□□□□ -2.04
SRP9P49458 AL360182.1-201ENST00000397433 468 ntBASIC2.28□□□□□ -2.04
SRP9P49458 FAT1P1-201ENST00000406588 507 ntBASIC2.28□□□□□ -2.04
SRP9P49458 RPL21P32-201ENST00000419877 477 ntBASIC2.28□□□□□ -2.04
SRP9P49458 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.28□□□□□ -2.04
SRP9P49458 AC063976.3-201ENST00000426849 329 ntBASIC2.28□□□□□ -2.04
SRP9P49458 AC112220.1-201ENST00000434628 355 ntBASIC2.28□□□□□ -2.04
SRP9P49458 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.28□□□□□ -2.04
SRP9P49458 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.28□□□□□ -2.04
SRP9P49458 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.28□□□□□ -2.04
SRP9P49458 TPTE2P6-202ENST00000445572 1007 ntBASIC2.28□□□□□ -2.04
SRP9P49458 AL590664.1-201ENST00000448065 339 ntBASIC2.28□□□□□ -2.04
SRP9P49458 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.28□□□□□ -2.04
SRP9P49458 MTCO3P44-201ENST00000510977 541 ntBASIC2.28□□□□□ -2.04
SRP9P49458 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.28□□□□□ -2.04
SRP9P49458 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.28□□□□□ -2.04
SRP9P49458 AC100870.1-201ENST00000522035 505 ntBASIC2.28□□□□□ -2.04
SRP9P49458 MTCO1P47-201ENST00000523889 1271 ntBASIC2.28□□□□□ -2.04
SRP9P49458 SUB1P1-201ENST00000524415 382 ntBASIC2.28□□□□□ -2.04
SRP9P49458 OR10V3P-201ENST00000525712 725 ntBASIC2.28□□□□□ -2.04
SRP9P49458 AP000790.1-201ENST00000528891 737 ntBASIC2.28□□□□□ -2.04
SRP9P49458 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SRP9P49458 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SRP9P49458 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.28□□□□□ -2.04
SRP9P49458 MIR5694-201ENST00000581190 76 ntBASIC2.28□□□□□ -2.04
SRP9P49458 MIR4635-201ENST00000583759 79 ntBASIC2.28□□□□□ -2.04
SRP9P49458 AC011471.1-201ENST00000585766 187 ntBASIC2.28□□□□□ -2.04
SRP9P49458 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.28□□□□□ -2.04
SRP9P49458 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.28□□□□□ -2.04
SRP9P49458 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.28□□□□□ -2.04
SRP9P49458 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.28□□□□□ -2.04
SRP9P49458 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.28□□□□□ -2.04
SRP9P49458 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.28□□□□□ -2.04
SRP9P49458 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SRP9P49458 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SRP9P49458 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.28□□□□□ -2.05
SRP9P49458 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.27□□□□□ -2.05
SRP9P49458 AC007342.9-201ENST00000623877 1385 ntBASIC2.27□□□□□ -2.05
SRP9P49458 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.27□□□□□ -2.05
SRP9P49458 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
SRP9P49458 FRG1BP-201ENST00000278882 761 ntBASIC2.27□□□□□ -2.05
SRP9P49458 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SRP9P49458 RNU1-112P-201ENST00000364401 164 ntBASIC2.27□□□□□ -2.05
SRP9P49458 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SRP9P49458 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms