Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AP001542.2-201ENST00000593141 364 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.61□□□□□ -1.99
CD74P04233 AC068620.3-201ENST00000602749 560 ntBASIC2.61□□□□□ -1.99
CD74P04233 DUXAP4-201ENST00000603046 613 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.61□□□□□ -1.99
CD74P04233 RPAP2P1-201ENST00000603626 1168 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC025588.3-201ENST00000604182 274 ntBASIC2.61□□□□□ -1.99
CD74P04233 AP000238.1-201ENST00000608759 426 ntBASIC2.61□□□□□ -1.99
CD74P04233 AL138880.2-201ENST00000616214 239 ntBASIC2.61□□□□□ -1.99
CD74P04233 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC253576.2-201ENST00000618815 580 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC012314.7-201ENST00000619693 93 ntBASIC2.61□□□□□ -1.99
CD74P04233 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.61□□□□□ -1.99
CD74P04233 AP000676.4-201ENST00000624659 623 ntBASIC2.61□□□□□ -1.99
CD74P04233 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.61□□□□□ -1.99
CD74P04233 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CD74P04233 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CD74P04233 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CD74P04233 AL035425.3-201ENST00000564206 4996 ntBASIC2.61□□□□□ -1.99
CD74P04233 AC111188.2-201ENST00000529697 1387 ntBASIC2.61□□□□□ -1.99
CD74P04233 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.61□□□□□ -1.99
CD74P04233 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.6□□□□□ -1.99
CD74P04233 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.6□□□□□ -1.99
CD74P04233 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.6□□□□□ -1.99
CD74P04233 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.6□□□□□ -1.99
CD74P04233 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CD74P04233 AC091564.4-201ENST00000533934 2194 ntBASIC2.6□□□□□ -1.99
CD74P04233 AC233263.6-201ENST00000631132 1963 ntBASIC2.6□□□□□ -1.99
CD74P04233 AP003122.5-201ENST00000527668 3766 ntBASIC2.6□□□□□ -1.99
CD74P04233 RNU6-263P-201ENST00000363811 107 ntBASIC2.6□□□□□ -1.99
CD74P04233 AC234772.1-201ENST00000377927 937 ntBASIC2.6□□□□□ -1.99
CD74P04233 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
CD74P04233 RNU6-339P-201ENST00000384310 107 ntBASIC2.6□□□□□ -1.99
CD74P04233 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CD74P04233 MTCO2P31-201ENST00000402702 684 ntBASIC2.6□□□□□ -1.99
CD74P04233 RNU6-575P-201ENST00000411326 105 ntBASIC2.6□□□□□ -1.99
CD74P04233 HMGN1P24-201ENST00000412282 298 ntBASIC2.6□□□□□ -1.99
CD74P04233 AL024507.1-201ENST00000412741 274 ntBASIC2.6□□□□□ -1.99
CD74P04233 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.6□□□□□ -1.99
CD74P04233 AL451074.5-201ENST00000415894 435 ntBASIC2.6□□□□□ -1.99
CD74P04233 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.6□□□□□ -1.99
CD74P04233 RPL7P10-201ENST00000417407 739 ntBASIC2.6□□□□□ -1.99
CD74P04233 AC233981.1-201ENST00000423224 461 ntBASIC2.6□□□□□ -1.99
CD74P04233 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.6□□□□□ -1.99
CD74P04233 DUTP6-201ENST00000425573 462 ntBASIC2.6□□□□□ -1.99
CD74P04233 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.6□□□□□ -1.99
CD74P04233 AC109583.1-201ENST00000432156 268 ntBASIC2.6□□□□□ -1.99
CD74P04233 HMGN2P31-201ENST00000432430 273 ntBASIC2.6□□□□□ -1.99
CD74P04233 MTCYBP15-201ENST00000433123 1127 ntBASIC2.6□□□□□ -1.99
CD74P04233 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.6□□□□□ -1.99
CD74P04233 RPS29P6-201ENST00000438196 145 ntBASIC2.6□□□□□ -1.99
CD74P04233 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.6□□□□□ -1.99
CD74P04233 AC108734.1-201ENST00000439549 399 ntBASIC2.6□□□□□ -1.99
CD74P04233 RPL23AP58-201ENST00000440453 469 ntBASIC2.6□□□□□ -1.99
CD74P04233 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.6□□□□□ -1.99
CD74P04233 AL049829.1-201ENST00000465411 156 ntBASIC2.6□□□□□ -1.99
CD74P04233 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.6□□□□□ -1.99
CD74P04233 AC106707.2-201ENST00000484182 374 ntBASIC2.6□□□□□ -1.99
CD74P04233 OR5H5P-201ENST00000503164 928 ntBASIC2.6□□□□□ -1.99
CD74P04233 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.6□□□□□ -1.99
CD74P04233 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CD74P04233 AC048346.1-201ENST00000510247 144 ntBASIC2.6□□□□□ -1.99
CD74P04233 OR5G4P-201ENST00000525251 760 ntBASIC2.6□□□□□ -1.99
CD74P04233 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.6□□□□□ -1.99
CD74P04233 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.6□□□□□ -1.99
CD74P04233 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
CD74P04233 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.6□□□□□ -1.99
CD74P04233 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.6□□□□□ -1.99
CD74P04233 AC074051.3-201ENST00000570238 358 ntBASIC2.6□□□□□ -1.99
CD74P04233 ZNF415P1-201ENST00000582279 1166 ntBASIC2.6□□□□□ -1.99
CD74P04233 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.6□□□□□ -1.99
CD74P04233 AC107871.2-201ENST00000612894 502 ntBASIC2.6□□□□□ -1.99
CD74P04233 AL355810.1-201ENST00000614629 552 ntBASIC2.6□□□□□ -1.99
CD74P04233 AC105227.2-201ENST00000615075 605 ntBASIC2.6□□□□□ -1.99
CD74P04233 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.6□□□□□ -1.99
CD74P04233 AL512427.1-201ENST00000618593 349 ntBASIC2.6□□□□□ -1.99
CD74P04233 Z99129.2-201ENST00000619967 314 ntBASIC2.6□□□□□ -1.99
CD74P04233 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.6□□□□□ -1.99
CD74P04233 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.6□□□□□ -1.99
CD74P04233 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.59□□□□□ -1.99
CD74P04233 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CD74P04233 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CD74P04233 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -1.99
CD74P04233 RNA5SP258-201ENST00000362750 119 ntBASIC2.59□□□□□ -1.99
CD74P04233 RNU6-799P-201ENST00000363567 107 ntBASIC2.59□□□□□ -1.99
CD74P04233 RNA5SP139-201ENST00000364340 117 ntBASIC2.59□□□□□ -1.99
CD74P04233 RNU6-619P-201ENST00000365146 108 ntBASIC2.59□□□□□ -1.99
CD74P04233 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CD74P04233 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CD74P04233 RNU6-761P-201ENST00000384148 107 ntBASIC2.59□□□□□ -1.99
CD74P04233 RNU6-921P-201ENST00000384361 107 ntBASIC2.59□□□□□ -1.99
CD74P04233 RNU6-549P-201ENST00000384433 107 ntBASIC2.59□□□□□ -1.99
CD74P04233 MIR23A-201ENST00000385245 73 ntBASIC2.59□□□□□ -1.99
CD74P04233 AL357075.1-201ENST00000404107 726 ntBASIC2.59□□□□□ -1.99
CD74P04233 AL590004.2-201ENST00000404787 371 ntBASIC2.59□□□□□ -1.99
CD74P04233 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CD74P04233 SNORA11.1-201ENST00000408133 129 ntBASIC2.59□□□□□ -1.99
CD74P04233 RNU4-78P-201ENST00000410940 126 ntBASIC2.59□□□□□ -1.99
CD74P04233 BTF3P8-201ENST00000414577 526 ntBASIC2.59□□□□□ -1.99
CD74P04233 RPS29P4-201ENST00000414733 161 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms