Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC007115.1-201ENST00000546853 234 ntBASIC3.54□□□□□ -1.84
CLPTM1O96005 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.54□□□□□ -1.84
CLPTM1O96005 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.54□□□□□ -1.84
CLPTM1O96005 AC007224.1-201ENST00000564410 144 ntBASIC3.54□□□□□ -1.84
CLPTM1O96005 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.54□□□□□ -1.84
CLPTM1O96005 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.54□□□□□ -1.84
CLPTM1O96005 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.54□□□□□ -1.84
CLPTM1O96005 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.54□□□□□ -1.84
CLPTM1O96005 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.54□□□□□ -1.84
CLPTM1O96005 U73023.1-201ENST00000603134 700 ntBASIC3.54□□□□□ -1.84
CLPTM1O96005 AL596327.1-201ENST00000603629 213 ntBASIC3.54□□□□□ -1.84
CLPTM1O96005 MTCYBP22-201ENST00000603788 447 ntBASIC3.54□□□□□ -1.84
CLPTM1O96005 ZYXP1-201ENST00000617638 118 ntBASIC3.54□□□□□ -1.84
CLPTM1O96005 AC068831.8-201ENST00000620171 435 ntBASIC3.54□□□□□ -1.84
CLPTM1O96005 AC112484.5-201ENST00000624189 228 ntBASIC3.54□□□□□ -1.84
CLPTM1O96005 AL356596.1-201ENST00000624230 379 ntBASIC3.54□□□□□ -1.84
CLPTM1O96005 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.54□□□□□ -1.84
CLPTM1O96005 AC068724.3-201ENST00000625906 87 ntBASIC3.54□□□□□ -1.84
CLPTM1O96005 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.54□□□□□ -1.84
CLPTM1O96005 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.54□□□□□ -1.84
CLPTM1O96005 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
CLPTM1O96005 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLPTM1O96005 AC092326.2-201ENST00000624772 1561 ntBASIC3.54□□□□□ -1.84
CLPTM1O96005 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
CLPTM1O96005 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLPTM1O96005 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.54□□□□□ -1.84
CLPTM1O96005 AL672296.1-201ENST00000427780 2158 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLPTM1O96005 AC007256.1-201ENST00000392253 2765 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CLPTM1O96005 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CLPTM1O96005 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
CLPTM1O96005 RNU1-75P-201ENST00000347264 129 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 SNORA60-201ENST00000362396 134 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 RNA5SP88-201ENST00000365560 109 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLPTM1O96005 AP002088.1-201ENST00000382740 395 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 RNU6-1226P-201ENST00000384317 107 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 EIF5P1-201ENST00000400019 1231 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AL121972.1-201ENST00000402023 252 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AL023807.1-201ENST00000407932 359 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AC073264.1-201ENST00000411508 416 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 RPS3AP9-201ENST00000417027 792 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AL356095.1-201ENST00000417217 199 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.53□□□□□ -1.84
CLPTM1O96005 AC006989.1-201ENST00000427212 131 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.53□□□□□ -1.84
CLPTM1O96005 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.53□□□□□ -1.84
CLPTM1O96005 AC092473.1-201ENST00000441098 221 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 RPL23AP16-201ENST00000441715 421 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AL662791.1-201ENST00000441992 928 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 RPS4XP4-201ENST00000443195 763 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.53□□□□□ -1.84
CLPTM1O96005 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.53□□□□□ -1.84
CLPTM1O96005 MEMO1P3-201ENST00000459811 302 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 RPL30P9-201ENST00000465586 330 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 RPS15AP17-201ENST00000470598 390 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.53□□□□□ -1.84
CLPTM1O96005 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.53□□□□□ -1.84
CLPTM1O96005 DSTNP2-201ENST00000504533 515 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 TXNP6-201ENST00000510190 310 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AC026412.2-201ENST00000512270 1075 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AC006499.2-201ENST00000513470 337 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AC016065.2-201ENST00000514530 444 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.53□□□□□ -1.84
CLPTM1O96005 RN7SKP289-201ENST00000517244 295 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.53□□□□□ -1.84
CLPTM1O96005 AC239860.2-201ENST00000525886 270 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLPTM1O96005 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.53□□□□□ -1.84
CLPTM1O96005 AC023161.2-201ENST00000551218 780 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.53□□□□□ -1.84
CLPTM1O96005 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.53□□□□□ -1.84
CLPTM1O96005 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.53□□□□□ -1.84
CLPTM1O96005 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.53□□□□□ -1.84
CLPTM1O96005 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLPTM1O96005 BNIP3P11-201ENST00000603878 563 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AL137849.1-201ENST00000604767 169 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AL031775.1-201ENST00000607014 887 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AC106028.5-201ENST00000610332 395 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.53□□□□□ -1.84
CLPTM1O96005 AC068722.2-201ENST00000618734 544 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.53□□□□□ -1.84
CLPTM1O96005 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.53□□□□□ -1.84
CLPTM1O96005 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.53□□□□□ -1.84
CLPTM1O96005 AC127502.3-201ENST00000636170 1206 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 AC058791.1-201ENST00000608412 3198 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 MTND5P28-201ENST00000438005 1594 ntBASIC3.53□□□□□ -1.84
CLPTM1O96005 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CLPTM1O96005 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLPTM1O96005 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CLPTM1O96005 SPRR2C-201ENST00000290702 219 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 MIR372-201ENST00000362225 67 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 RNU6-1243P-201ENST00000364028 107 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 Y_RNA.201-201ENST00000364052 96 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 SNORA7.2-201ENST00000364446 145 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 RNU4-24P-201ENST00000364565 139 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 RNA5SP479-201ENST00000364858 117 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 RNU6-805P-201ENST00000365643 106 ntBASIC3.52□□□□□ -1.85
CLPTM1O96005 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms