Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC004943.3-201ENST00000624116 600 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.77□□□□□ -1.97
RGPD3A6NKT7 AC008432.1-201ENST00000615912 1320 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
RGPD3A6NKT7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.77□□□□□ -1.97
RGPD3A6NKT7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
RGPD3A6NKT7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RGPD3A6NKT7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.77□□□□□ -1.97
RGPD3A6NKT7 MIR583-201ENST00000384846 75 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 MIR499A-201ENST00000384903 122 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 SNORA48.3-201ENST00000391081 134 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 AL096701.2-201ENST00000416920 238 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 OR4K11P-201ENST00000431829 904 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RGPD3A6NKT7 RPL38P4-201ENST00000502376 214 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 AC108078.2-201ENST00000510750 236 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.77□□□□□ -1.97
RGPD3A6NKT7 MIR6132-201ENST00000622083 109 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 AC093591.3-201ENST00000634516 308 ntBASIC2.77□□□□□ -1.97
RGPD3A6NKT7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.76□□□□□ -1.97
RGPD3A6NKT7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RGPD3A6NKT7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RGPD3A6NKT7 AC011155.1-201ENST00000316512 456 ntBASIC2.76□□□□□ -1.97
RGPD3A6NKT7 DHFRP5-201ENST00000406944 564 ntBASIC2.76□□□□□ -1.97
RGPD3A6NKT7 RNA5SP270-201ENST00000411361 118 ntBASIC2.76□□□□□ -1.97
RGPD3A6NKT7 SAR1AP4-201ENST00000429225 591 ntBASIC2.76□□□□□ -1.97
RGPD3A6NKT7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.76□□□□□ -1.97
RGPD3A6NKT7 RPL7P31-201ENST00000450192 724 ntBASIC2.76□□□□□ -1.97
RGPD3A6NKT7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.76□□□□□ -1.97
RGPD3A6NKT7 AC012170.1-201ENST00000495139 359 ntBASIC2.76□□□□□ -1.97
RGPD3A6NKT7 OR5D17P-201ENST00000531492 978 ntBASIC2.76□□□□□ -1.97
RGPD3A6NKT7 MIR4255-201ENST00000579351 72 ntBASIC2.76□□□□□ -1.97
RGPD3A6NKT7 BX664608.1-201ENST00000610519 487 ntBASIC2.76□□□□□ -1.97
RGPD3A6NKT7 AC002076.2-201ENST00000617362 122 ntBASIC2.76□□□□□ -1.97
RGPD3A6NKT7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
RGPD3A6NKT7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RGPD3A6NKT7 AP001148.1-201ENST00000624124 2359 ntBASIC2.75□□□□□ -1.97
RGPD3A6NKT7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
RGPD3A6NKT7 MIR337-201ENST00000362281 93 ntBASIC2.75□□□□□ -1.97
RGPD3A6NKT7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.75□□□□□ -1.97
RGPD3A6NKT7 AL513175.2-201ENST00000422071 443 ntBASIC2.75□□□□□ -1.97
RGPD3A6NKT7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.75□□□□□ -1.97
RGPD3A6NKT7 CR769767.1-201ENST00000436337 346 ntBASIC2.75□□□□□ -1.97
RGPD3A6NKT7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.75□□□□□ -1.97
RGPD3A6NKT7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.75□□□□□ -1.97
RGPD3A6NKT7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.75□□□□□ -1.97
RGPD3A6NKT7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.75□□□□□ -1.97
RGPD3A6NKT7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.75□□□□□ -1.97
RGPD3A6NKT7 C2orf27A-204ENST00000623058 969 ntBASIC2.75□□□□□ -1.97
RGPD3A6NKT7 AC009501.3-201ENST00000605001 1352 ntBASIC2.75□□□□□ -1.97
RGPD3A6NKT7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
RGPD3A6NKT7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.75□□□□□ -1.97
RGPD3A6NKT7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RGPD3A6NKT7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RGPD3A6NKT7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 RN7SKP226-201ENST00000364912 300 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 AL445646.1-201ENST00000431784 216 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 RPL36AP33-201ENST00000450395 310 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 SNORD116-26-201ENST00000516006 96 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 AC007536.1-201ENST00000533382 349 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 AC012531.5-201ENST00000611375 151 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 XIST_intron.1-201ENST00000619444 68 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 AC073348.1-201ENST00000623002 331 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 RNU6-457P-201ENST00000363999 107 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 SNORA25.9-201ENST00000365087 128 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 ELOCP10-201ENST00000440624 327 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 TRAV31-201ENST00000502780 342 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.74□□□□□ -1.97
RGPD3A6NKT7 ELOCP34-201ENST00000604436 327 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 OR1S1-201ENST00000624470 978 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 AC084035.1-201ENST00000634543 607 ntBASIC2.74□□□□□ -1.97
RGPD3A6NKT7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RGPD3A6NKT7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.73□□□□□ -1.97
RGPD3A6NKT7 NAMPTP2-201ENST00000505629 1115 ntBASIC2.73□□□□□ -1.97
RGPD3A6NKT7 AP003467.2-201ENST00000520175 319 ntBASIC2.73□□□□□ -1.97
RGPD3A6NKT7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.73□□□□□ -1.97
RGPD3A6NKT7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.73□□□□□ -1.97
RGPD3A6NKT7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.73□□□□□ -1.97
RGPD3A6NKT7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.73□□□□□ -1.97
RGPD3A6NKT7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.73□□□□□ -1.97
RGPD3A6NKT7 AC009318.3-201ENST00000616916 503 ntBASIC2.73□□□□□ -1.97
RGPD3A6NKT7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.73□□□□□ -1.97
RGPD3A6NKT7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RGPD3A6NKT7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RGPD3A6NKT7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.73□□□□□ -1.97
RGPD3A6NKT7 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.72□□□□□ -1.97
RGPD3A6NKT7 U8.10-201ENST00000384260 133 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms