Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 PSPHP1-201ENST00000450062 261 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 CYCSP53-201ENST00000455540 265 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 RNU6-420P-201ENST00000458780 107 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 RNU7-23P-201ENST00000459465 62 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC104164.3-201ENST00000467363 1258 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 MTCYBP17-201ENST00000503579 789 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 DEFB108D-201ENST00000527787 222 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC118942.1-201ENST00000529674 1035 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC021006.3-201ENST00000530771 192 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 SETP7-201ENST00000552169 453 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 GTF2IP22-201ENST00000554443 182 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC104229.1-201ENST00000561364 255 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 SULT1C2P1-202ENST00000562418 459 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 MIR3921-201ENST00000577308 85 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC015688.2-201ENST00000584523 262 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC093227.2-201ENST00000589357 285 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC013444.2-201ENST00000603317 787 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AP005137.2-201ENST00000609238 400 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AL162373.1-201ENST00000620433 407 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AP001784.1-201ENST00000624107 428 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC009039.2-201ENST00000624524 529 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AL137003.2-201ENST00000606924 2538 ntBASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CDC42SE1Q9NRR8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 RNA5SP197-201ENST00000363357 119 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 RNU6-115P-201ENST00000364310 107 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 SNORA16B-201ENST00000364674 135 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 ESD-201ENST00000378697 1079 ntTSL 5 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 RNU6-1035P-201ENST00000384477 107 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 RNA5SP284-201ENST00000384547 118 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 SNORD116-23-201ENST00000384645 92 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 MIR525-201ENST00000384978 85 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 MIR17-201ENST00000385012 84 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AL139098.1-201ENST00000407291 389 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 RPL35AP24-201ENST00000413846 330 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 FCF1P2-201ENST00000415284 583 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 GTF2IP20-201ENST00000431663 360 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC024082.2-201ENST00000434771 238 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 RPS3AP54-201ENST00000435535 734 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 TAAR7P-201ENST00000436141 242 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 TRY2P-201ENST00000448860 689 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 CEACAMP11-201ENST00000455211 583 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AL049714.1-201ENST00000466686 347 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC126182.1-201ENST00000478134 357 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC084024.2-201ENST00000503480 791 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC008413.1-201ENST00000511864 177 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 MRPS36P2-201ENST00000512569 299 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 MRPL49P2-201ENST00000521066 465 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 ARL2BPP5-201ENST00000523141 481 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 OR5B10P-201ENST00000532869 642 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 CYCSP26-201ENST00000534107 320 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC120057.2-201ENST00000571520 271 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 MIR4448-201ENST00000584360 86 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC008749.1-201ENST00000597650 306 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 GAS5-AS1-201ENST00000602767 694 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC005972.3-201ENST00000606304 481 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC005046.1-201ENST00000608515 625 ntBASIC1.41□□□□□ -2.18
CDC42SE1Q9NRR8 AC103710.4-201ENST00000609301 899 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms