Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 MIR6500-201ENST00000622700 86 ntBASIC4.08□□□□□ -1.76
HDAC4P56524 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HDAC4P56524 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
HDAC4P56524 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.07□□□□□ -1.76
HDAC4P56524 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.07□□□□□ -1.76
HDAC4P56524 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.07□□□□□ -1.76
HDAC4P56524 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HDAC4P56524 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HDAC4P56524 RPL21P132-201ENST00000331267 462 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 RN7SKP280-201ENST00000364196 304 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 Y_RNA.302-201ENST00000364997 102 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 MIR554-201ENST00000384874 96 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 RNU6-628P-201ENST00000410675 107 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.07□□□□□ -1.76
HDAC4P56524 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.07□□□□□ -1.76
HDAC4P56524 LARP1BP3-201ENST00000437229 869 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 AL117351.1-201ENST00000438864 766 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.07□□□□□ -1.76
HDAC4P56524 RPL21P89-201ENST00000444021 467 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.07□□□□□ -1.76
HDAC4P56524 AL358232.1-201ENST00000448030 501 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 MTND1P29-201ENST00000448112 647 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 ARPC3P5-201ENST00000448802 534 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.07□□□□□ -1.76
HDAC4P56524 AC092754.2-201ENST00000463506 460 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HDAC4P56524 OR2A20P-203ENST00000498397 1268 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.07□□□□□ -1.76
HDAC4P56524 TMEM251P1-201ENST00000503717 318 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 MTCO3P44-201ENST00000510977 541 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.07□□□□□ -1.76
HDAC4P56524 MTCYBP43-201ENST00000513621 740 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 RNU6-150P-201ENST00000516237 95 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.07□□□□□ -1.76
HDAC4P56524 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.07□□□□□ -1.76
HDAC4P56524 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.07□□□□□ -1.76
HDAC4P56524 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.07□□□□□ -1.76
HDAC4P56524 MIR3944-201ENST00000581277 108 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 MIR4444-1-201ENST00000581696 74 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 MIR4444-2-201ENST00000584390 74 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.07□□□□□ -1.76
HDAC4P56524 AL592436.1-201ENST00000605135 558 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 MIR486-1-201ENST00000612171 68 ntBASIC4.07□□□□□ -1.76
HDAC4P56524 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDAC4P56524 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDAC4P56524 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.07□□□□□ -1.76
HDAC4P56524 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HDAC4P56524 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC4P56524 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HDAC4P56524 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.06□□□□□ -1.76
HDAC4P56524 SNORD82-201ENST00000365530 70 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC4P56524 RNU6-339P-201ENST00000384310 107 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 RNU6-837P-201ENST00000391056 108 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AC007066.1-201ENST00000392902 381 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 TPMTP3-201ENST00000411928 735 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 MORF4L1P6-201ENST00000418771 268 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 Z97055.1-201ENST00000419730 712 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AC244035.1-201ENST00000430042 390 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 ZYG11AP1-201ENST00000430329 837 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 ATP5HP2-201ENST00000433885 485 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.06□□□□□ -1.76
HDAC4P56524 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.06□□□□□ -1.76
HDAC4P56524 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.06□□□□□ -1.76
HDAC4P56524 USP9YP34-201ENST00000453983 808 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 RPL31P3-201ENST00000458430 332 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 RPL30P9-201ENST00000465586 330 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AC072039.1-201ENST00000477611 581 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AC109486.1-201ENST00000486833 374 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AC078918.1-201ENST00000498515 228 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.06□□□□□ -1.76
HDAC4P56524 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
HDAC4P56524 AC023141.12-201ENST00000512399 199 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 RNU6-1231P-201ENST00000517185 103 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 NARSP2-201ENST00000518524 679 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.06□□□□□ -1.76
HDAC4P56524 AC060788.1-201ENST00000521318 469 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.06□□□□□ -1.76
HDAC4P56524 HSPA8P13-201ENST00000523715 472 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.06□□□□□ -1.76
HDAC4P56524 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC4P56524 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDAC4P56524 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.06□□□□□ -1.76
HDAC4P56524 AC136618.2-201ENST00000575091 400 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AC006270.2-201ENST00000578523 652 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 NBR2-204ENST00000587322 63 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AC010928.3-201ENST00000587712 541 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.06□□□□□ -1.76
HDAC4P56524 AL355812.1-201ENST00000603215 216 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AL590229.1-201ENST00000603497 542 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 RPL23AP92-201ENST00000603609 255 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 RNU6-88P-201ENST00000606801 100 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AC080013.4-201ENST00000607624 649 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.06□□□□□ -1.76
HDAC4P56524 AC025588.4-201ENST00000615802 908 ntBASIC4.06□□□□□ -1.76
HDAC4P56524 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
HDAC4P56524 AL139089.1-201ENST00000620372 975 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms