Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SHC1P29353 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SHC1P29353 SNORA5A-201ENST00000384111 134 ntBASIC3.29□□□□□ -1.88
SHC1P29353 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
SHC1P29353 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.29□□□□□ -1.88
SHC1P29353 RN7SKP285-201ENST00000410137 318 ntBASIC3.29□□□□□ -1.88
SHC1P29353 RN7SKP27-201ENST00000410684 333 ntBASIC3.29□□□□□ -1.88
SHC1P29353 TPMTP3-201ENST00000411928 735 ntBASIC3.29□□□□□ -1.88
SHC1P29353 MTCO3P41-201ENST00000414801 328 ntBASIC3.29□□□□□ -1.88
SHC1P29353 SYF2P2-201ENST00000417620 583 ntBASIC3.29□□□□□ -1.88
SHC1P29353 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.29□□□□□ -1.88
SHC1P29353 MUPP-201ENST00000438111 566 ntBASIC3.29□□□□□ -1.88
SHC1P29353 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SHC1P29353 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.29□□□□□ -1.88
SHC1P29353 TRIM60P18-201ENST00000441518 828 ntBASIC3.29□□□□□ -1.88
SHC1P29353 AC004865.1-201ENST00000442276 1003 ntBASIC3.29□□□□□ -1.88
SHC1P29353 MTCO1P19-201ENST00000443487 500 ntBASIC3.29□□□□□ -1.88
SHC1P29353 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.29□□□□□ -1.88
SHC1P29353 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.29□□□□□ -1.88
SHC1P29353 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.29□□□□□ -1.88
SHC1P29353 AL133547.1-201ENST00000448546 220 ntBASIC3.29□□□□□ -1.88
SHC1P29353 PPIAP3-201ENST00000450588 505 ntBASIC3.29□□□□□ -1.88
SHC1P29353 KATNBL1P6-201ENST00000453433 915 ntBASIC3.29□□□□□ -1.88
SHC1P29353 RPL7P38-201ENST00000488396 739 ntBASIC3.29□□□□□ -1.88
SHC1P29353 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.29□□□□□ -1.88
SHC1P29353 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHC1P29353 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.29□□□□□ -1.88
SHC1P29353 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.29□□□□□ -1.88
SHC1P29353 AC008885.2-201ENST00000509506 930 ntBASIC3.29□□□□□ -1.88
SHC1P29353 AC104619.4-201ENST00000510773 249 ntBASIC3.29□□□□□ -1.88
SHC1P29353 AC010625.1-201ENST00000511296 403 ntBASIC3.29□□□□□ -1.88
SHC1P29353 RPL7L1P13-201ENST00000511702 739 ntBASIC3.29□□□□□ -1.88
SHC1P29353 AC091965.2-201ENST00000512324 613 ntBASIC3.29□□□□□ -1.88
SHC1P29353 RNY4P37-201ENST00000516225 96 ntBASIC3.29□□□□□ -1.88
SHC1P29353 SNORA70.18-201ENST00000516696 98 ntBASIC3.29□□□□□ -1.88
SHC1P29353 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.29□□□□□ -1.88
SHC1P29353 HIGD1AP6-201ENST00000521833 279 ntBASIC3.29□□□□□ -1.88
SHC1P29353 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.29□□□□□ -1.88
SHC1P29353 OR5AK1P-201ENST00000524837 922 ntBASIC3.29□□□□□ -1.88
SHC1P29353 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
SHC1P29353 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.29□□□□□ -1.88
SHC1P29353 AL391156.1-201ENST00000554965 554 ntBASIC3.29□□□□□ -1.88
SHC1P29353 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.29□□□□□ -1.88
SHC1P29353 AC006362.1-201ENST00000567392 174 ntBASIC3.29□□□□□ -1.88
SHC1P29353 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.29□□□□□ -1.88
SHC1P29353 AC012414.6-201ENST00000568241 401 ntBASIC3.29□□□□□ -1.88
SHC1P29353 AGGF1P4-201ENST00000568249 801 ntBASIC3.29□□□□□ -1.88
SHC1P29353 AC138915.2-201ENST00000569776 97 ntBASIC3.29□□□□□ -1.88
SHC1P29353 MIR1254-2-201ENST00000579553 63 ntBASIC3.29□□□□□ -1.88
SHC1P29353 RMST_8.1-201ENST00000610287 165 ntBASIC3.29□□□□□ -1.88
SHC1P29353 AC005332.6-201ENST00000613178 446 ntBASIC3.29□□□□□ -1.88
SHC1P29353 AL031667.3-201ENST00000620124 655 ntBASIC3.29□□□□□ -1.88
SHC1P29353 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SHC1P29353 AC068792.1-201ENST00000621354 417 ntBASIC3.29□□□□□ -1.88
SHC1P29353 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
SHC1P29353 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.29□□□□□ -1.88
SHC1P29353 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.29□□□□□ -1.88
SHC1P29353 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.29□□□□□ -1.88
SHC1P29353 MKKS-204ENST00000639674 192 ntBASIC3.29□□□□□ -1.88
SHC1P29353 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SHC1P29353 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHC1P29353 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHC1P29353 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
SHC1P29353 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHC1P29353 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHC1P29353 AC007656.2-201ENST00000624902 4547 ntBASIC3.28□□□□□ -1.88
SHC1P29353 MTND4P4-201ENST00000439033 1366 ntBASIC3.28□□□□□ -1.88
SHC1P29353 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.28□□□□□ -1.88
SHC1P29353 DCAF13P1-201ENST00000495256 1330 ntBASIC3.28□□□□□ -1.88
SHC1P29353 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SHC1P29353 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHC1P29353 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHC1P29353 AL672167.1-206ENST00000356293 943 ntBASIC3.28□□□□□ -1.88
SHC1P29353 RNU4-21P-201ENST00000362802 126 ntBASIC3.28□□□□□ -1.88
SHC1P29353 RNU6-492P-201ENST00000363035 104 ntBASIC3.28□□□□□ -1.88
SHC1P29353 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHC1P29353 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHC1P29353 SUGT1P1-201ENST00000379514 476 ntBASIC3.28□□□□□ -1.88
SHC1P29353 Y_RNA.553-201ENST00000384670 102 ntBASIC3.28□□□□□ -1.88
SHC1P29353 RNU6-253P-201ENST00000384730 105 ntBASIC3.28□□□□□ -1.88
SHC1P29353 MIR153-1-201ENST00000384914 90 ntBASIC3.28□□□□□ -1.88
SHC1P29353 RNU6-192P-201ENST00000391253 100 ntBASIC3.28□□□□□ -1.88
SHC1P29353 CYCSP45-201ENST00000402289 315 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AL136116.1-201ENST00000403591 381 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AL139098.1-201ENST00000407291 389 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AL136133.1-201ENST00000413694 376 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.28□□□□□ -1.88
SHC1P29353 FCF1P2-201ENST00000415284 583 ntBASIC3.28□□□□□ -1.88
SHC1P29353 DBIP2-201ENST00000419076 262 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AC245054.1-201ENST00000420944 258 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.28□□□□□ -1.88
SHC1P29353 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.28□□□□□ -1.88
SHC1P29353 RPL31P54-201ENST00000429803 370 ntBASIC3.28□□□□□ -1.88
SHC1P29353 USP9YP14-201ENST00000430663 563 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.28□□□□□ -1.88
SHC1P29353 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.28□□□□□ -1.88
SHC1P29353 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.28□□□□□ -1.88
SHC1P29353 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.28□□□□□ -1.88
SHC1P29353 AC239367.2-201ENST00000447309 705 ntBASIC3.28□□□□□ -1.88
SHC1P29353 AL034418.1-201ENST00000448675 860 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms